The crystal structure of dg(se-rp)-dna:pol x product binary complex
PDB DOI: 10.2210/pdb8ili/pdb
Classification: REPLICATION/DNA Organism(s): African Swine Fever Virus (Strain Badajoz 1971 Vero-Adapted) , Synthetic Construct
Deposited: 2023-03-03 Deposition Author(s): Gan, J.H. , Huang, Z. , Qin, T.
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*CP*GP*GP*AP*TP*CP*CP*(7S8))-3') | e | 8 | NA | CGGATCCG |
| DNA (5'-D(*CP*GP*GP*AP*TP*CP*CP*(7S8))-3') | f | 8 | NA | CGGATCCG |
| DNA (5'-D(*CP*GP*GP*AP*TP*CP*CP*(7S8))-3') | g | 8 | NA | CGGATCCG |
| DNA (5'-D(*CP*GP*GP*AP*TP*CP*CP*(7S8))-3') | h | 8 | NA | CGGATCCG |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Repair DNA polymerase X | A | 177 | African Swine Fever Virus (Strain Badajoz 1971 Vero-Adapted) , Synthetic Construct | GGGMLTLIQGKKIVNHLRSRLAFEYNGQLIKILSKNIVAVGSLRREEKMLNDVDLLIIVPEKKLLKHVLPNIRIKGLSFSVKVCGERKCVLFIEWEKKTYQLDLFTALAEEKPYAIFHFTGPVSYLIRIRAALKKKNYKLNQYGLFKNQTLVPLKITTEKELIKELGFTYRIPKKRL |
| Repair DNA polymerase X | B | 177 | African Swine Fever Virus (Strain Badajoz 1971 Vero-Adapted) , Synthetic Construct | GGGMLTLIQGKKIVNHLRSRLAFEYNGQLIKILSKNIVAVGSLRREEKMLNDVDLLIIVPEKKLLKHVLPNIRIKGLSFSVKVCGERKCVLFIEWEKKTYQLDLFTALAEEKPYAIFHFTGPVSYLIRIRAALKKKNYKLNQYGLFKNQTLVPLKITTEKELIKELGFTYRIPKKRL |
| Repair DNA polymerase X | C | 177 | African Swine Fever Virus (Strain Badajoz 1971 Vero-Adapted) , Synthetic Construct | GGGMLTLIQGKKIVNHLRSRLAFEYNGQLIKILSKNIVAVGSLRREEKMLNDVDLLIIVPEKKLLKHVLPNIRIKGLSFSVKVCGERKCVLFIEWEKKTYQLDLFTALAEEKPYAIFHFTGPVSYLIRIRAALKKKNYKLNQYGLFKNQTLVPLKITTEKELIKELGFTYRIPKKRL |
| Repair DNA polymerase X | D | 177 | African Swine Fever Virus (Strain Badajoz 1971 Vero-Adapted) , Synthetic Construct | GGGMLTLIQGKKIVNHLRSRLAFEYNGQLIKILSKNIVAVGSLRREEKMLNDVDLLIIVPEKKLLKHVLPNIRIKGLSFSVKVCGERKCVLFIEWEKKTYQLDLFTALAEEKPYAIFHFTGPVSYLIRIRAALKKKNYKLNQYGLFKNQTLVPLKITTEKELIKELGFTYRIPKKRL |
Method: X-RAY DIFFRACTION