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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8HRA

Structure of heptameric rdra ring in rna-loading state

PDB DOI: 10.2210/pdb8hra/pdb

Classification: IMMUNE SYSTEM
Organism(s): Escherichia Coli , Synthetic Construct

Deposited: 2022-12-15
Deposition Author(s): Gao, Y.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.76 Å

8hra
Literature

Structure of heptameric rdra ring in rna-loading state

Gao, Y.

Primary Citation of Related Structures: 8HRA


Proteins
Molecule Chains Sequence Length Organism Sequence
Archaeal ATPase A 947 Escherichia Coli , Synthetic Construct MTDSVQTETTEGKIIINLFAPNLPGSTKEDDLIQKSLRDQLVESIRNSIAYPDTDKFAGLTRFIDESGRNVFFVDGTRGAGKTTFINSVVKSLNSDQDDVKVNIKCLPTIDPTKLPRHEPILVTVTARLNKMVSDKLKGYWASNDYRKQKEQWQNHLAQLQRGLHLLTDKEYKPEYFSDALKLDAQLDYSIGGQDLSEIFEELVKRACEILDCKAILITFDDIDTQFDAGWDVLESIRKFFNSRKLVVVATGDLRLYSQLIRGKQYENYSKTLLEQEKESVRLAERGYMVEHLEQQYLLKLFPVQKRIQLKTMLQLVGEKGKAGKEEIKVKTEPGMQDIDAIDVRQAIGDAVREGLNLREGSDADMYVNELLKQPVRLLMQVLQDFYTKKYHATSVKLDGKQSRNERPNELSVPNLLRNALYGSMLSSIYRAGLNYEQHRFGMDSLCKDIFTYVKQDRDFNTGFYLRPQSESEALRNCSIYLASQVSENCQGSLSKFLQMLLVGCGSVSIFNQFVTELARAENDREKFEQLISEYVAYMSVGRIESASHWANRCCAVVANSPNDEKIGVFLGMVQLNRKSRQHMPGGYKKFNIDTENGLAKAAMASSLSTVASNNLMDFCSVFNLIGAIADISACRCERSAITNAFNKVIAQTTCIVPPWSEAAVRAEMKGSSKSADNDAAVLDVDLDPKDDGVIDESQQDDATEFSDAITKVEQWLKNVNEIEIGIRPSALLIGKVWSRFYFNLNNVADQHKTRLYRNAEHGRMASQSNAAKIMRFNVLAFLHAVLVEESLYHSVSDREYIGEGLRLNPVTSVDEFEKKIKIIGEKLKADNKTWKNTHPLFFLLISCPILHPFIFPVGGINCSVKALNKETSFNKLIDEIVGDKLLSDEEWDYLTKNNDQKTNTRQQIFQNTITSLNSSTIVGASYDKDTPARKTKSPLLGDSEEK
Archaeal ATPase B 947 Escherichia Coli , Synthetic Construct MTDSVQTETTEGKIIINLFAPNLPGSTKEDDLIQKSLRDQLVESIRNSIAYPDTDKFAGLTRFIDESGRNVFFVDGTRGAGKTTFINSVVKSLNSDQDDVKVNIKCLPTIDPTKLPRHEPILVTVTARLNKMVSDKLKGYWASNDYRKQKEQWQNHLAQLQRGLHLLTDKEYKPEYFSDALKLDAQLDYSIGGQDLSEIFEELVKRACEILDCKAILITFDDIDTQFDAGWDVLESIRKFFNSRKLVVVATGDLRLYSQLIRGKQYENYSKTLLEQEKESVRLAERGYMVEHLEQQYLLKLFPVQKRIQLKTMLQLVGEKGKAGKEEIKVKTEPGMQDIDAIDVRQAIGDAVREGLNLREGSDADMYVNELLKQPVRLLMQVLQDFYTKKYHATSVKLDGKQSRNERPNELSVPNLLRNALYGSMLSSIYRAGLNYEQHRFGMDSLCKDIFTYVKQDRDFNTGFYLRPQSESEALRNCSIYLASQVSENCQGSLSKFLQMLLVGCGSVSIFNQFVTELARAENDREKFEQLISEYVAYMSVGRIESASHWANRCCAVVANSPNDEKIGVFLGMVQLNRKSRQHMPGGYKKFNIDTENGLAKAAMASSLSTVASNNLMDFCSVFNLIGAIADISACRCERSAITNAFNKVIAQTTCIVPPWSEAAVRAEMKGSSKSADNDAAVLDVDLDPKDDGVIDESQQDDATEFSDAITKVEQWLKNVNEIEIGIRPSALLIGKVWSRFYFNLNNVADQHKTRLYRNAEHGRMASQSNAAKIMRFNVLAFLHAVLVEESLYHSVSDREYIGEGLRLNPVTSVDEFEKKIKIIGEKLKADNKTWKNTHPLFFLLISCPILHPFIFPVGGINCSVKALNKETSFNKLIDEIVGDKLLSDEEWDYLTKNNDQKTNTRQQIFQNTITSLNSSTIVGASYDKDTPARKTKSPLLGDSEEK
Archaeal ATPase C 947 Escherichia Coli , Synthetic Construct MTDSVQTETTEGKIIINLFAPNLPGSTKEDDLIQKSLRDQLVESIRNSIAYPDTDKFAGLTRFIDESGRNVFFVDGTRGAGKTTFINSVVKSLNSDQDDVKVNIKCLPTIDPTKLPRHEPILVTVTARLNKMVSDKLKGYWASNDYRKQKEQWQNHLAQLQRGLHLLTDKEYKPEYFSDALKLDAQLDYSIGGQDLSEIFEELVKRACEILDCKAILITFDDIDTQFDAGWDVLESIRKFFNSRKLVVVATGDLRLYSQLIRGKQYENYSKTLLEQEKESVRLAERGYMVEHLEQQYLLKLFPVQKRIQLKTMLQLVGEKGKAGKEEIKVKTEPGMQDIDAIDVRQAIGDAVREGLNLREGSDADMYVNELLKQPVRLLMQVLQDFYTKKYHATSVKLDGKQSRNERPNELSVPNLLRNALYGSMLSSIYRAGLNYEQHRFGMDSLCKDIFTYVKQDRDFNTGFYLRPQSESEALRNCSIYLASQVSENCQGSLSKFLQMLLVGCGSVSIFNQFVTELARAENDREKFEQLISEYVAYMSVGRIESASHWANRCCAVVANSPNDEKIGVFLGMVQLNRKSRQHMPGGYKKFNIDTENGLAKAAMASSLSTVASNNLMDFCSVFNLIGAIADISACRCERSAITNAFNKVIAQTTCIVPPWSEAAVRAEMKGSSKSADNDAAVLDVDLDPKDDGVIDESQQDDATEFSDAITKVEQWLKNVNEIEIGIRPSALLIGKVWSRFYFNLNNVADQHKTRLYRNAEHGRMASQSNAAKIMRFNVLAFLHAVLVEESLYHSVSDREYIGEGLRLNPVTSVDEFEKKIKIIGEKLKADNKTWKNTHPLFFLLISCPILHPFIFPVGGINCSVKALNKETSFNKLIDEIVGDKLLSDEEWDYLTKNNDQKTNTRQQIFQNTITSLNSSTIVGASYDKDTPARKTKSPLLGDSEEK
Archaeal ATPase D 947 Escherichia Coli , Synthetic Construct MTDSVQTETTEGKIIINLFAPNLPGSTKEDDLIQKSLRDQLVESIRNSIAYPDTDKFAGLTRFIDESGRNVFFVDGTRGAGKTTFINSVVKSLNSDQDDVKVNIKCLPTIDPTKLPRHEPILVTVTARLNKMVSDKLKGYWASNDYRKQKEQWQNHLAQLQRGLHLLTDKEYKPEYFSDALKLDAQLDYSIGGQDLSEIFEELVKRACEILDCKAILITFDDIDTQFDAGWDVLESIRKFFNSRKLVVVATGDLRLYSQLIRGKQYENYSKTLLEQEKESVRLAERGYMVEHLEQQYLLKLFPVQKRIQLKTMLQLVGEKGKAGKEEIKVKTEPGMQDIDAIDVRQAIGDAVREGLNLREGSDADMYVNELLKQPVRLLMQVLQDFYTKKYHATSVKLDGKQSRNERPNELSVPNLLRNALYGSMLSSIYRAGLNYEQHRFGMDSLCKDIFTYVKQDRDFNTGFYLRPQSESEALRNCSIYLASQVSENCQGSLSKFLQMLLVGCGSVSIFNQFVTELARAENDREKFEQLISEYVAYMSVGRIESASHWANRCCAVVANSPNDEKIGVFLGMVQLNRKSRQHMPGGYKKFNIDTENGLAKAAMASSLSTVASNNLMDFCSVFNLIGAIADISACRCERSAITNAFNKVIAQTTCIVPPWSEAAVRAEMKGSSKSADNDAAVLDVDLDPKDDGVIDESQQDDATEFSDAITKVEQWLKNVNEIEIGIRPSALLIGKVWSRFYFNLNNVADQHKTRLYRNAEHGRMASQSNAAKIMRFNVLAFLHAVLVEESLYHSVSDREYIGEGLRLNPVTSVDEFEKKIKIIGEKLKADNKTWKNTHPLFFLLISCPILHPFIFPVGGINCSVKALNKETSFNKLIDEIVGDKLLSDEEWDYLTKNNDQKTNTRQQIFQNTITSLNSSTIVGASYDKDTPARKTKSPLLGDSEEK
Archaeal ATPase E 947 Escherichia Coli , Synthetic Construct MTDSVQTETTEGKIIINLFAPNLPGSTKEDDLIQKSLRDQLVESIRNSIAYPDTDKFAGLTRFIDESGRNVFFVDGTRGAGKTTFINSVVKSLNSDQDDVKVNIKCLPTIDPTKLPRHEPILVTVTARLNKMVSDKLKGYWASNDYRKQKEQWQNHLAQLQRGLHLLTDKEYKPEYFSDALKLDAQLDYSIGGQDLSEIFEELVKRACEILDCKAILITFDDIDTQFDAGWDVLESIRKFFNSRKLVVVATGDLRLYSQLIRGKQYENYSKTLLEQEKESVRLAERGYMVEHLEQQYLLKLFPVQKRIQLKTMLQLVGEKGKAGKEEIKVKTEPGMQDIDAIDVRQAIGDAVREGLNLREGSDADMYVNELLKQPVRLLMQVLQDFYTKKYHATSVKLDGKQSRNERPNELSVPNLLRNALYGSMLSSIYRAGLNYEQHRFGMDSLCKDIFTYVKQDRDFNTGFYLRPQSESEALRNCSIYLASQVSENCQGSLSKFLQMLLVGCGSVSIFNQFVTELARAENDREKFEQLISEYVAYMSVGRIESASHWANRCCAVVANSPNDEKIGVFLGMVQLNRKSRQHMPGGYKKFNIDTENGLAKAAMASSLSTVASNNLMDFCSVFNLIGAIADISACRCERSAITNAFNKVIAQTTCIVPPWSEAAVRAEMKGSSKSADNDAAVLDVDLDPKDDGVIDESQQDDATEFSDAITKVEQWLKNVNEIEIGIRPSALLIGKVWSRFYFNLNNVADQHKTRLYRNAEHGRMASQSNAAKIMRFNVLAFLHAVLVEESLYHSVSDREYIGEGLRLNPVTSVDEFEKKIKIIGEKLKADNKTWKNTHPLFFLLISCPILHPFIFPVGGINCSVKALNKETSFNKLIDEIVGDKLLSDEEWDYLTKNNDQKTNTRQQIFQNTITSLNSSTIVGASYDKDTPARKTKSPLLGDSEEK
Archaeal ATPase G 947 Escherichia Coli , Synthetic Construct MTDSVQTETTEGKIIINLFAPNLPGSTKEDDLIQKSLRDQLVESIRNSIAYPDTDKFAGLTRFIDESGRNVFFVDGTRGAGKTTFINSVVKSLNSDQDDVKVNIKCLPTIDPTKLPRHEPILVTVTARLNKMVSDKLKGYWASNDYRKQKEQWQNHLAQLQRGLHLLTDKEYKPEYFSDALKLDAQLDYSIGGQDLSEIFEELVKRACEILDCKAILITFDDIDTQFDAGWDVLESIRKFFNSRKLVVVATGDLRLYSQLIRGKQYENYSKTLLEQEKESVRLAERGYMVEHLEQQYLLKLFPVQKRIQLKTMLQLVGEKGKAGKEEIKVKTEPGMQDIDAIDVRQAIGDAVREGLNLREGSDADMYVNELLKQPVRLLMQVLQDFYTKKYHATSVKLDGKQSRNERPNELSVPNLLRNALYGSMLSSIYRAGLNYEQHRFGMDSLCKDIFTYVKQDRDFNTGFYLRPQSESEALRNCSIYLASQVSENCQGSLSKFLQMLLVGCGSVSIFNQFVTELARAENDREKFEQLISEYVAYMSVGRIESASHWANRCCAVVANSPNDEKIGVFLGMVQLNRKSRQHMPGGYKKFNIDTENGLAKAAMASSLSTVASNNLMDFCSVFNLIGAIADISACRCERSAITNAFNKVIAQTTCIVPPWSEAAVRAEMKGSSKSADNDAAVLDVDLDPKDDGVIDESQQDDATEFSDAITKVEQWLKNVNEIEIGIRPSALLIGKVWSRFYFNLNNVADQHKTRLYRNAEHGRMASQSNAAKIMRFNVLAFLHAVLVEESLYHSVSDREYIGEGLRLNPVTSVDEFEKKIKIIGEKLKADNKTWKNTHPLFFLLISCPILHPFIFPVGGINCSVKALNKETSFNKLIDEIVGDKLLSDEEWDYLTKNNDQKTNTRQQIFQNTITSLNSSTIVGASYDKDTPARKTKSPLLGDSEEK
Archaeal ATPase H 947 Escherichia Coli , Synthetic Construct MTDSVQTETTEGKIIINLFAPNLPGSTKEDDLIQKSLRDQLVESIRNSIAYPDTDKFAGLTRFIDESGRNVFFVDGTRGAGKTTFINSVVKSLNSDQDDVKVNIKCLPTIDPTKLPRHEPILVTVTARLNKMVSDKLKGYWASNDYRKQKEQWQNHLAQLQRGLHLLTDKEYKPEYFSDALKLDAQLDYSIGGQDLSEIFEELVKRACEILDCKAILITFDDIDTQFDAGWDVLESIRKFFNSRKLVVVATGDLRLYSQLIRGKQYENYSKTLLEQEKESVRLAERGYMVEHLEQQYLLKLFPVQKRIQLKTMLQLVGEKGKAGKEEIKVKTEPGMQDIDAIDVRQAIGDAVREGLNLREGSDADMYVNELLKQPVRLLMQVLQDFYTKKYHATSVKLDGKQSRNERPNELSVPNLLRNALYGSMLSSIYRAGLNYEQHRFGMDSLCKDIFTYVKQDRDFNTGFYLRPQSESEALRNCSIYLASQVSENCQGSLSKFLQMLLVGCGSVSIFNQFVTELARAENDREKFEQLISEYVAYMSVGRIESASHWANRCCAVVANSPNDEKIGVFLGMVQLNRKSRQHMPGGYKKFNIDTENGLAKAAMASSLSTVASNNLMDFCSVFNLIGAIADISACRCERSAITNAFNKVIAQTTCIVPPWSEAAVRAEMKGSSKSADNDAAVLDVDLDPKDDGVIDESQQDDATEFSDAITKVEQWLKNVNEIEIGIRPSALLIGKVWSRFYFNLNNVADQHKTRLYRNAEHGRMASQSNAAKIMRFNVLAFLHAVLVEESLYHSVSDREYIGEGLRLNPVTSVDEFEKKIKIIGEKLKADNKTWKNTHPLFFLLISCPILHPFIFPVGGINCSVKALNKETSFNKLIDEIVGDKLLSDEEWDYLTKNNDQKTNTRQQIFQNTITSLNSSTIVGASYDKDTPARKTKSPLLGDSEEK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*GP*UP*CP*CP*AP*GP*CP*GP*UP*CP*AP*UP*CP*GP*CP*UP*GP*GP*AP*C)-3') k 20 NA GUCCAGCGUCAUCGCUGGAC
RNA (5'-R(P*GP*UP*CP*CP*AP*GP*CP*GP*UP*CP*AP*UP*CP*GP*CP*UP*GP*GP*AP*C)-3') l 20 NA GUCCAGCGUCAUCGCUGGAC
RNA (5'-R(P*GP*UP*CP*CP*AP*GP*CP*GP*UP*CP*AP*UP*CP*GP*CP*UP*GP*GP*AP*C)-3') m 20 NA GUCCAGCGUCAUCGCUGGAC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-12-15
Deposition Author(s): Gao, Y.