8GRY
Cryo-em structure of sars-cov-2 omicron ba.2 rbd in complex with rat ace2 (local refinement)
PDB DOI: 10.2210/pdb8gry/pdb
Classification: HYDROLASE/VIRAL PROTEIN Organism(s): Rattus Norvegicus , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2022-09-03 Deposition Author(s): Chai, Y. , Gao, G.F. , Qi, J.X. , Xie, Y.F. , Zhao, Z.N.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.29 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Processed angiotensin-converting enzyme 2 | A | 597 | Rattus Norvegicus , Severe Acute Respiratory Syndrome Coronavirus 2 | SLIEEKAESFLNKFNQEAEDLSYQSSLASWNYNTNITEENAQKMNEAAAKWSAFYEEQSKIAQNFSLQEIQNATIKRQLKALQQSGSSALSPDKNKQLNTILNTMSTIYSTGKVCNSMNPQECFLLEPGLDEIMATSTDYNRRLWAWEGWRAEVGKQLRPLYEEYVVLKNEMARANNYEDYGDYWRGDYEAEGVEGYNYNRNQLIEDVENTFKEIKPLYEQLHAYVRTKLMEVYPSYISPTGCLPAHLLGDMWGRFWTNLYPLTTPFLQKPNIDVTDAMVNQSWDAERIFKEAEKFFVSVGLPQMTPGFWTNSMLTEPGDDRKVVCHPTAWDLGHGDFRIKMCTKVTMDNFLTAHHEMGHIQYDMAYAKQPFLLRNGANEGFHEAVGEIMSLSAATPKHLKSIGLLPSNFQEDNETEINFLLKQALTIVGTLPFTYMLEKWRWMVFQDKIPREQWTKKWWEMKREIVGVVEPLPHDETYCDPASLFHVSNDYSFIRYYTRTIYQFQFQEALCQAAKHDGPLHKCDISNSTEAGQKLLNMLSLGNSGPWTLALENVVGSRNMDVKPLLNYFQPLFVWLKEQNRNSTVGWSTDWSPYAD |
| Spike protein S1 | B | 195 | Rattus Norvegicus , Severe Acute Respiratory Syndrome Coronavirus 2 | TNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGP |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-09-03 Deposition Author(s): Chai, Y. , Gao, G.F. , Qi, J.X. , Xie, Y.F. , Zhao, Z.N.