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FASTA Sequence PDB Format mmCIF Format
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8GJE

Hiv-1 env subtype c cza97.12 sosip.664 in complex with 3bnc117 fab

PDB DOI: 10.2210/pdb8gje/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2023-03-15
Deposition Author(s): Lee, J.H. , Ozorowski, G. , Ward, A.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.4 Å

8gje
Literature

Hiv-1 env subtype c cza97.12 sosip.664 in complex with 3bnc117 fab

Lee, J.H. , Ozorowski, G. , Ward, A.B.

Primary Citation of Related Structures: 8GJE


Proteins
Molecule Chains Sequence Length Organism Sequence
CZA97.12 SOSIP.664 Envelope glycoprotein gp120 A 503 Homo Sapiens , Human Immunodeficiency Virus 1 MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARVGNMWVTVYYGVPVWTDAKTTLFCASDTKAYDREVHNVWATHACVPTDPNPQEIVLENVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLHCTNATFKNNVTNDMNKEIRNCSFNTTTEIRDKKQQGYALFYRPDIVLLKENRNNSNNSEYILINCNASTITQACPKVNFDPIPIHYCAPAGYAILKCNNKTFSGKGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIIRSENLTDNVKTIIVHLNKSVEIVCTRPNNNTRKSMRIGPGQTFYATGDIIGDIRQAYCNISGSKWNETLKRVKEKLQENYNNNKTIKFAPSSGGDLEITTHSFNCRGEFFYCNTTRLFNNNATEDETITLPCRIKQIINMWQGVGRAMYAPPIAGNITCKSNITGLLLVRDGGEDNKTEEIFRPGGGNMKDNWRSELYKYKVIELKPLGIAPTGCKRRVVERRRRRR
CZA97.12 SOSIP.664 Envelope glycoprotein gp120 C 503 Homo Sapiens , Human Immunodeficiency Virus 1 MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARVGNMWVTVYYGVPVWTDAKTTLFCASDTKAYDREVHNVWATHACVPTDPNPQEIVLENVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLHCTNATFKNNVTNDMNKEIRNCSFNTTTEIRDKKQQGYALFYRPDIVLLKENRNNSNNSEYILINCNASTITQACPKVNFDPIPIHYCAPAGYAILKCNNKTFSGKGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIIRSENLTDNVKTIIVHLNKSVEIVCTRPNNNTRKSMRIGPGQTFYATGDIIGDIRQAYCNISGSKWNETLKRVKEKLQENYNNNKTIKFAPSSGGDLEITTHSFNCRGEFFYCNTTRLFNNNATEDETITLPCRIKQIINMWQGVGRAMYAPPIAGNITCKSNITGLLLVRDGGEDNKTEEIFRPGGGNMKDNWRSELYKYKVIELKPLGIAPTGCKRRVVERRRRRR
CZA97.12 SOSIP.664 Envelope glycoprotein gp120 D 503 Homo Sapiens , Human Immunodeficiency Virus 1 MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARVGNMWVTVYYGVPVWTDAKTTLFCASDTKAYDREVHNVWATHACVPTDPNPQEIVLENVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLHCTNATFKNNVTNDMNKEIRNCSFNTTTEIRDKKQQGYALFYRPDIVLLKENRNNSNNSEYILINCNASTITQACPKVNFDPIPIHYCAPAGYAILKCNNKTFSGKGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIIRSENLTDNVKTIIVHLNKSVEIVCTRPNNNTRKSMRIGPGQTFYATGDIIGDIRQAYCNISGSKWNETLKRVKEKLQENYNNNKTIKFAPSSGGDLEITTHSFNCRGEFFYCNTTRLFNNNATEDETITLPCRIKQIINMWQGVGRAMYAPPIAGNITCKSNITGLLLVRDGGEDNKTEEIFRPGGGNMKDNWRSELYKYKVIELKPLGIAPTGCKRRVVERRRRRR
CZA97.12 SOSIP.664 Envelope glycoprotein gp41 B 153 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAVFLGFLGAAGSTMGAASMTLTVQARQLLSSIVQQQSNLLRAPEAQQHMLKLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICCTNVPWNSSWSNKSQTDIWNNMTWMEWDREISNYTDTIYRLLEDSQTQQEKNEKDLLALD
CZA97.12 SOSIP.664 Envelope glycoprotein gp41 E 153 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAVFLGFLGAAGSTMGAASMTLTVQARQLLSSIVQQQSNLLRAPEAQQHMLKLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICCTNVPWNSSWSNKSQTDIWNNMTWMEWDREISNYTDTIYRLLEDSQTQQEKNEKDLLALD
CZA97.12 SOSIP.664 Envelope glycoprotein gp41 F 153 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAVFLGFLGAAGSTMGAASMTLTVQARQLLSSIVQQQSNLLRAPEAQQHMLKLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICCTNVPWNSSWSNKSQTDIWNNMTWMEWDREISNYTDTIYRLLEDSQTQQEKNEKDLLALD
3BNC117 Fab heavy chain H 226 Homo Sapiens , Human Immunodeficiency Virus 1 QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
3BNC117 Fab heavy chain G 226 Homo Sapiens , Human Immunodeficiency Virus 1 QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
3BNC117 Fab heavy chain I 226 Homo Sapiens , Human Immunodeficiency Virus 1 QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
3BNC117 kappa light chain L 206 Homo Sapiens , Human Immunodeficiency Virus 1 DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
3BNC117 kappa light chain J 206 Homo Sapiens , Human Immunodeficiency Virus 1 DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
3BNC117 kappa light chain K 206 Homo Sapiens , Human Immunodeficiency Virus 1 DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-03-15
Deposition Author(s): Lee, J.H. , Ozorowski, G. , Ward, A.B.