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FASTA Sequence PDB Format mmCIF Format
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8GAS

Vfp48.02 fab in complex with bg505 ds-sosip env trimer

PDB DOI: 10.2210/pdb8gas/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes

Deposited: 2023-02-23
Deposition Author(s): Gorman, J. , Kwong, P.D.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.04 Å

Literature

Vfp48.02 fab in complex with bg505 ds-sosip env trimer

Gorman, J. , Kwong, P.D.

Primary Citation of Related Structures: 8GAS


Proteins
Molecule Chains Sequence Length Organism Sequence
vFP48.02 light chain L 112 Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes DVVMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLDSGVPDRFTGSGSGTDFTLKISRVEAEDLGIYYCWQGTHFPQTFGGGTRLEIK
vFP48.02 light chain A 112 Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes DVVMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLDSGVPDRFTGSGSGTDFTLKISRVEAEDLGIYYCWQGTHFPQTFGGGTRLEIK
vFP48.02 light chain F 112 Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes DVVMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLDSGVPDRFTGSGSGTDFTLKISRVEAEDLGIYYCWQGTHFPQTFGGGTRLEIK
vFP48.02 heavy chain H 122 Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes QVQLQQPGAEFVKPGASVRMSCKASGYTFTSYWIAWVKQRPGQGLEWIGDIYPGSGYTNYNGKFKNRATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGGTTFVAEPWLAYWGQGTLVAVSA
vFP48.02 heavy chain C 122 Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes QVQLQQPGAEFVKPGASVRMSCKASGYTFTSYWIAWVKQRPGQGLEWIGDIYPGSGYTNYNGKFKNRATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGGTTFVAEPWLAYWGQGTLVAVSA
vFP48.02 heavy chain I 122 Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes QVQLQQPGAEFVKPGASVRMSCKASGYTFTSYWIAWVKQRPGQGLEWIGDIYPGSGYTNYNGKFKNRATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGGTTFVAEPWLAYWGQGTLVAVSA
Envelope glycoprotein gp120 G 481 Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Envelope glycoprotein gp120 D 481 Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Envelope glycoprotein gp120 J 481 Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Envelope glycoprotein gp41 B 153 Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp41 E 153 Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp41 K 153 Anoxybacillus Sp. Lm18-11 , Enterobacter Aerogenes AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-02-23
Deposition Author(s): Gorman, J. , Kwong, P.D.