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8FWJ

Structure of dodecameric kaic-rs-s413e/s414e complexed with kaib-rs solved by cryo-em

PDB DOI: 10.2210/pdb8fwj/pdb

Classification: CIRCADIAN CLOCK PROTEIN
Organism(s): Cereibacter Sphaeroides

Deposited: 2023-01-22
Deposition Author(s): Bradshaw, N. , Grant, T. , Grigorieff, N. , Hoemberger, M.S. , Kern, D. , Otten, R. , Padua, R.A.P. , Pitsawong, W.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.7 Å

8fwj
Literature

Structure of dodecameric kaic-rs-s413e/s414e complexed with kaib-rs solved by cryo-em

Bradshaw, N. , Grant, T. , Grigorieff, N. , Hoemberger, M.S. , Kern, D. , Otten, R. , Padua, R.A.P. , Pitsawong, W.

Primary Citation of Related Structures: 8FWJ


Proteins
Molecule Chains Sequence Length Organism Sequence
Circadian clock protein KaiC A 568 Cereibacter Sphaeroides GAMGIGKSPTGIQGFDELTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGVRDHGEPGVFVTFEERPEDIVNNVASLGFELDKLIEEEKIAIEHIAVDPSEVAEIGDYDLEGLFLRLELAIDTVGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWLKERGLTTVITAERGDGALTRQGLEEYVSDCVILLDHRVENQISTRRLRIVKYRGTAHGTNEYPFLIDTDGFSVLPVSALGLLHQVHEERIASGVPDLDAMMAGGGFFRGSSILVSGVAGAGKSSLAAHFAAAACARGERAMYFSFEEAADQAVRNMRSLGLDLGRWRDAGLLRFMATRPTFYSLEMHLAVILREVMRFEPSVVVLDPISAFTESGDRLEVQSMLLRIVDFLKNRGITGIFTHLAHSQNEATTDAGLEELMDGWVLMLNREVNGEFNRELYLLKARGMAHSNQVREFLMSDRGISLLPPHLGEGGALTGTARKAEEARLRRAEIERQTELGRLQQQIEQRRRRARAQIEALEAELQAEEIALKALVESESAHERQRLADADTLARSRGNERFADLLMNKGE
Circadian clock protein KaiC B 568 Cereibacter Sphaeroides GAMGIGKSPTGIQGFDELTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGVRDHGEPGVFVTFEERPEDIVNNVASLGFELDKLIEEEKIAIEHIAVDPSEVAEIGDYDLEGLFLRLELAIDTVGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWLKERGLTTVITAERGDGALTRQGLEEYVSDCVILLDHRVENQISTRRLRIVKYRGTAHGTNEYPFLIDTDGFSVLPVSALGLLHQVHEERIASGVPDLDAMMAGGGFFRGSSILVSGVAGAGKSSLAAHFAAAACARGERAMYFSFEEAADQAVRNMRSLGLDLGRWRDAGLLRFMATRPTFYSLEMHLAVILREVMRFEPSVVVLDPISAFTESGDRLEVQSMLLRIVDFLKNRGITGIFTHLAHSQNEATTDAGLEELMDGWVLMLNREVNGEFNRELYLLKARGMAHSNQVREFLMSDRGISLLPPHLGEGGALTGTARKAEEARLRRAEIERQTELGRLQQQIEQRRRRARAQIEALEAELQAEEIALKALVESESAHERQRLADADTLARSRGNERFADLLMNKGE
Circadian clock protein KaiC C 568 Cereibacter Sphaeroides GAMGIGKSPTGIQGFDELTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGVRDHGEPGVFVTFEERPEDIVNNVASLGFELDKLIEEEKIAIEHIAVDPSEVAEIGDYDLEGLFLRLELAIDTVGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWLKERGLTTVITAERGDGALTRQGLEEYVSDCVILLDHRVENQISTRRLRIVKYRGTAHGTNEYPFLIDTDGFSVLPVSALGLLHQVHEERIASGVPDLDAMMAGGGFFRGSSILVSGVAGAGKSSLAAHFAAAACARGERAMYFSFEEAADQAVRNMRSLGLDLGRWRDAGLLRFMATRPTFYSLEMHLAVILREVMRFEPSVVVLDPISAFTESGDRLEVQSMLLRIVDFLKNRGITGIFTHLAHSQNEATTDAGLEELMDGWVLMLNREVNGEFNRELYLLKARGMAHSNQVREFLMSDRGISLLPPHLGEGGALTGTARKAEEARLRRAEIERQTELGRLQQQIEQRRRRARAQIEALEAELQAEEIALKALVESESAHERQRLADADTLARSRGNERFADLLMNKGE
Circadian clock protein KaiC D 568 Cereibacter Sphaeroides GAMGIGKSPTGIQGFDELTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGVRDHGEPGVFVTFEERPEDIVNNVASLGFELDKLIEEEKIAIEHIAVDPSEVAEIGDYDLEGLFLRLELAIDTVGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWLKERGLTTVITAERGDGALTRQGLEEYVSDCVILLDHRVENQISTRRLRIVKYRGTAHGTNEYPFLIDTDGFSVLPVSALGLLHQVHEERIASGVPDLDAMMAGGGFFRGSSILVSGVAGAGKSSLAAHFAAAACARGERAMYFSFEEAADQAVRNMRSLGLDLGRWRDAGLLRFMATRPTFYSLEMHLAVILREVMRFEPSVVVLDPISAFTESGDRLEVQSMLLRIVDFLKNRGITGIFTHLAHSQNEATTDAGLEELMDGWVLMLNREVNGEFNRELYLLKARGMAHSNQVREFLMSDRGISLLPPHLGEGGALTGTARKAEEARLRRAEIERQTELGRLQQQIEQRRRRARAQIEALEAELQAEEIALKALVESESAHERQRLADADTLARSRGNERFADLLMNKGE
Circadian clock protein KaiC E 568 Cereibacter Sphaeroides GAMGIGKSPTGIQGFDELTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGVRDHGEPGVFVTFEERPEDIVNNVASLGFELDKLIEEEKIAIEHIAVDPSEVAEIGDYDLEGLFLRLELAIDTVGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWLKERGLTTVITAERGDGALTRQGLEEYVSDCVILLDHRVENQISTRRLRIVKYRGTAHGTNEYPFLIDTDGFSVLPVSALGLLHQVHEERIASGVPDLDAMMAGGGFFRGSSILVSGVAGAGKSSLAAHFAAAACARGERAMYFSFEEAADQAVRNMRSLGLDLGRWRDAGLLRFMATRPTFYSLEMHLAVILREVMRFEPSVVVLDPISAFTESGDRLEVQSMLLRIVDFLKNRGITGIFTHLAHSQNEATTDAGLEELMDGWVLMLNREVNGEFNRELYLLKARGMAHSNQVREFLMSDRGISLLPPHLGEGGALTGTARKAEEARLRRAEIERQTELGRLQQQIEQRRRRARAQIEALEAELQAEEIALKALVESESAHERQRLADADTLARSRGNERFADLLMNKGE
Circadian clock protein KaiC F 568 Cereibacter Sphaeroides GAMGIGKSPTGIQGFDELTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGVRDHGEPGVFVTFEERPEDIVNNVASLGFELDKLIEEEKIAIEHIAVDPSEVAEIGDYDLEGLFLRLELAIDTVGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWLKERGLTTVITAERGDGALTRQGLEEYVSDCVILLDHRVENQISTRRLRIVKYRGTAHGTNEYPFLIDTDGFSVLPVSALGLLHQVHEERIASGVPDLDAMMAGGGFFRGSSILVSGVAGAGKSSLAAHFAAAACARGERAMYFSFEEAADQAVRNMRSLGLDLGRWRDAGLLRFMATRPTFYSLEMHLAVILREVMRFEPSVVVLDPISAFTESGDRLEVQSMLLRIVDFLKNRGITGIFTHLAHSQNEATTDAGLEELMDGWVLMLNREVNGEFNRELYLLKARGMAHSNQVREFLMSDRGISLLPPHLGEGGALTGTARKAEEARLRRAEIERQTELGRLQQQIEQRRRRARAQIEALEAELQAEEIALKALVESESAHERQRLADADTLARSRGNERFADLLMNKGE
Circadian clock protein KaiC G 568 Cereibacter Sphaeroides GAMGIGKSPTGIQGFDELTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGVRDHGEPGVFVTFEERPEDIVNNVASLGFELDKLIEEEKIAIEHIAVDPSEVAEIGDYDLEGLFLRLELAIDTVGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWLKERGLTTVITAERGDGALTRQGLEEYVSDCVILLDHRVENQISTRRLRIVKYRGTAHGTNEYPFLIDTDGFSVLPVSALGLLHQVHEERIASGVPDLDAMMAGGGFFRGSSILVSGVAGAGKSSLAAHFAAAACARGERAMYFSFEEAADQAVRNMRSLGLDLGRWRDAGLLRFMATRPTFYSLEMHLAVILREVMRFEPSVVVLDPISAFTESGDRLEVQSMLLRIVDFLKNRGITGIFTHLAHSQNEATTDAGLEELMDGWVLMLNREVNGEFNRELYLLKARGMAHSNQVREFLMSDRGISLLPPHLGEGGALTGTARKAEEARLRRAEIERQTELGRLQQQIEQRRRRARAQIEALEAELQAEEIALKALVESESAHERQRLADADTLARSRGNERFADLLMNKGE
Circadian clock protein KaiC H 568 Cereibacter Sphaeroides GAMGIGKSPTGIQGFDELTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGVRDHGEPGVFVTFEERPEDIVNNVASLGFELDKLIEEEKIAIEHIAVDPSEVAEIGDYDLEGLFLRLELAIDTVGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWLKERGLTTVITAERGDGALTRQGLEEYVSDCVILLDHRVENQISTRRLRIVKYRGTAHGTNEYPFLIDTDGFSVLPVSALGLLHQVHEERIASGVPDLDAMMAGGGFFRGSSILVSGVAGAGKSSLAAHFAAAACARGERAMYFSFEEAADQAVRNMRSLGLDLGRWRDAGLLRFMATRPTFYSLEMHLAVILREVMRFEPSVVVLDPISAFTESGDRLEVQSMLLRIVDFLKNRGITGIFTHLAHSQNEATTDAGLEELMDGWVLMLNREVNGEFNRELYLLKARGMAHSNQVREFLMSDRGISLLPPHLGEGGALTGTARKAEEARLRRAEIERQTELGRLQQQIEQRRRRARAQIEALEAELQAEEIALKALVESESAHERQRLADADTLARSRGNERFADLLMNKGE
Circadian clock protein KaiC I 568 Cereibacter Sphaeroides GAMGIGKSPTGIQGFDELTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGVRDHGEPGVFVTFEERPEDIVNNVASLGFELDKLIEEEKIAIEHIAVDPSEVAEIGDYDLEGLFLRLELAIDTVGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWLKERGLTTVITAERGDGALTRQGLEEYVSDCVILLDHRVENQISTRRLRIVKYRGTAHGTNEYPFLIDTDGFSVLPVSALGLLHQVHEERIASGVPDLDAMMAGGGFFRGSSILVSGVAGAGKSSLAAHFAAAACARGERAMYFSFEEAADQAVRNMRSLGLDLGRWRDAGLLRFMATRPTFYSLEMHLAVILREVMRFEPSVVVLDPISAFTESGDRLEVQSMLLRIVDFLKNRGITGIFTHLAHSQNEATTDAGLEELMDGWVLMLNREVNGEFNRELYLLKARGMAHSNQVREFLMSDRGISLLPPHLGEGGALTGTARKAEEARLRRAEIERQTELGRLQQQIEQRRRRARAQIEALEAELQAEEIALKALVESESAHERQRLADADTLARSRGNERFADLLMNKGE
Circadian clock protein KaiC J 568 Cereibacter Sphaeroides GAMGIGKSPTGIQGFDELTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGVRDHGEPGVFVTFEERPEDIVNNVASLGFELDKLIEEEKIAIEHIAVDPSEVAEIGDYDLEGLFLRLELAIDTVGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWLKERGLTTVITAERGDGALTRQGLEEYVSDCVILLDHRVENQISTRRLRIVKYRGTAHGTNEYPFLIDTDGFSVLPVSALGLLHQVHEERIASGVPDLDAMMAGGGFFRGSSILVSGVAGAGKSSLAAHFAAAACARGERAMYFSFEEAADQAVRNMRSLGLDLGRWRDAGLLRFMATRPTFYSLEMHLAVILREVMRFEPSVVVLDPISAFTESGDRLEVQSMLLRIVDFLKNRGITGIFTHLAHSQNEATTDAGLEELMDGWVLMLNREVNGEFNRELYLLKARGMAHSNQVREFLMSDRGISLLPPHLGEGGALTGTARKAEEARLRRAEIERQTELGRLQQQIEQRRRRARAQIEALEAELQAEEIALKALVESESAHERQRLADADTLARSRGNERFADLLMNKGE
Circadian clock protein KaiC K 568 Cereibacter Sphaeroides GAMGIGKSPTGIQGFDELTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGVRDHGEPGVFVTFEERPEDIVNNVASLGFELDKLIEEEKIAIEHIAVDPSEVAEIGDYDLEGLFLRLELAIDTVGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWLKERGLTTVITAERGDGALTRQGLEEYVSDCVILLDHRVENQISTRRLRIVKYRGTAHGTNEYPFLIDTDGFSVLPVSALGLLHQVHEERIASGVPDLDAMMAGGGFFRGSSILVSGVAGAGKSSLAAHFAAAACARGERAMYFSFEEAADQAVRNMRSLGLDLGRWRDAGLLRFMATRPTFYSLEMHLAVILREVMRFEPSVVVLDPISAFTESGDRLEVQSMLLRIVDFLKNRGITGIFTHLAHSQNEATTDAGLEELMDGWVLMLNREVNGEFNRELYLLKARGMAHSNQVREFLMSDRGISLLPPHLGEGGALTGTARKAEEARLRRAEIERQTELGRLQQQIEQRRRRARAQIEALEAELQAEEIALKALVESESAHERQRLADADTLARSRGNERFADLLMNKGE
Circadian clock protein KaiC L 568 Cereibacter Sphaeroides GAMGIGKSPTGIQGFDELTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGVRDHGEPGVFVTFEERPEDIVNNVASLGFELDKLIEEEKIAIEHIAVDPSEVAEIGDYDLEGLFLRLELAIDTVGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWLKERGLTTVITAERGDGALTRQGLEEYVSDCVILLDHRVENQISTRRLRIVKYRGTAHGTNEYPFLIDTDGFSVLPVSALGLLHQVHEERIASGVPDLDAMMAGGGFFRGSSILVSGVAGAGKSSLAAHFAAAACARGERAMYFSFEEAADQAVRNMRSLGLDLGRWRDAGLLRFMATRPTFYSLEMHLAVILREVMRFEPSVVVLDPISAFTESGDRLEVQSMLLRIVDFLKNRGITGIFTHLAHSQNEATTDAGLEELMDGWVLMLNREVNGEFNRELYLLKARGMAHSNQVREFLMSDRGISLLPPHLGEGGALTGTARKAEEARLRRAEIERQTELGRLQQQIEQRRRRARAQIEALEAELQAEEIALKALVESESAHERQRLADADTLARSRGNERFADLLMNKGE
Circadian clock protein KaiB M 92 Cereibacter Sphaeroides GAMGRRLVLYVAGQTPKSLAAISNLRRICEENLPGQYEVEVIDLKQNPRLAKEHSIVAIPTLVRELPVPIRKIIGDLSDKEQVLVNLKMDME
Circadian clock protein KaiB N 92 Cereibacter Sphaeroides GAMGRRLVLYVAGQTPKSLAAISNLRRICEENLPGQYEVEVIDLKQNPRLAKEHSIVAIPTLVRELPVPIRKIIGDLSDKEQVLVNLKMDME
Circadian clock protein KaiB O 92 Cereibacter Sphaeroides GAMGRRLVLYVAGQTPKSLAAISNLRRICEENLPGQYEVEVIDLKQNPRLAKEHSIVAIPTLVRELPVPIRKIIGDLSDKEQVLVNLKMDME
Circadian clock protein KaiB P 92 Cereibacter Sphaeroides GAMGRRLVLYVAGQTPKSLAAISNLRRICEENLPGQYEVEVIDLKQNPRLAKEHSIVAIPTLVRELPVPIRKIIGDLSDKEQVLVNLKMDME
Circadian clock protein KaiB Q 92 Cereibacter Sphaeroides GAMGRRLVLYVAGQTPKSLAAISNLRRICEENLPGQYEVEVIDLKQNPRLAKEHSIVAIPTLVRELPVPIRKIIGDLSDKEQVLVNLKMDME
Circadian clock protein KaiB R 92 Cereibacter Sphaeroides GAMGRRLVLYVAGQTPKSLAAISNLRRICEENLPGQYEVEVIDLKQNPRLAKEHSIVAIPTLVRELPVPIRKIIGDLSDKEQVLVNLKMDME
Circadian clock protein KaiB S 92 Cereibacter Sphaeroides GAMGRRLVLYVAGQTPKSLAAISNLRRICEENLPGQYEVEVIDLKQNPRLAKEHSIVAIPTLVRELPVPIRKIIGDLSDKEQVLVNLKMDME
Circadian clock protein KaiB T 92 Cereibacter Sphaeroides GAMGRRLVLYVAGQTPKSLAAISNLRRICEENLPGQYEVEVIDLKQNPRLAKEHSIVAIPTLVRELPVPIRKIIGDLSDKEQVLVNLKMDME
Circadian clock protein KaiB U 92 Cereibacter Sphaeroides GAMGRRLVLYVAGQTPKSLAAISNLRRICEENLPGQYEVEVIDLKQNPRLAKEHSIVAIPTLVRELPVPIRKIIGDLSDKEQVLVNLKMDME
Circadian clock protein KaiB V 92 Cereibacter Sphaeroides GAMGRRLVLYVAGQTPKSLAAISNLRRICEENLPGQYEVEVIDLKQNPRLAKEHSIVAIPTLVRELPVPIRKIIGDLSDKEQVLVNLKMDME
Circadian clock protein KaiB W 92 Cereibacter Sphaeroides GAMGRRLVLYVAGQTPKSLAAISNLRRICEENLPGQYEVEVIDLKQNPRLAKEHSIVAIPTLVRELPVPIRKIIGDLSDKEQVLVNLKMDME
Circadian clock protein KaiB X 92 Cereibacter Sphaeroides GAMGRRLVLYVAGQTPKSLAAISNLRRICEENLPGQYEVEVIDLKQNPRLAKEHSIVAIPTLVRELPVPIRKIIGDLSDKEQVLVNLKMDME
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-01-22
Deposition Author(s): Bradshaw, N. , Grant, T. , Grigorieff, N. , Hoemberger, M.S. , Kern, D. , Otten, R. , Padua, R.A.P. , Pitsawong, W.