8FU3
Structure of respiratory syncytial virus polymerase with novel non-nucleoside inhibitor
PDB DOI: 10.2210/pdb8fu3/pdb
Classification: VIRAL PROTEIN Organism(s): Human Respiratory Syncytial Virus A2
Deposited: 2023-01-16 Deposition Author(s): Abeywickrema, P. , Adhikary, S. , Behera, I. , Bhaumik, A. , Bonneux, B. , Bruyn, S.D. , Carbajo, R.J. , Decroly, E. , Fearns, R. , Fung, A. , Grosse, S. , Herschke, F. , Jacoby, E. , Jin, Z. , Jonckers, T.H.M. , Mclellan, J.S. , Miller, R. , Patrick, A. , Pham, Q. , Piassek, M. , Rigaux, P. , Roymans, D. , Shareef, A. , Sharma, S. , Sutto-Ortiz, P. , Verheyen, N. , Vlijmen, H.V. , Ysebaert, N. , Yu, X.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.88 Å
Structure of respiratory syncytial virus polymerase with novel non-nucleoside inhibitor
Abeywickrema, P. , Adhikary, S. , Behera, I. , Bhaumik, A. , Bonneux, B. , Bruyn, S.D. , Carbajo, R.J. , Decroly, E. , Fearns, R. , Fung, A. , Grosse, S. , Herschke, F. , Jacoby, E. , Jin, Z. , Jonckers, T.H.M. , Mclellan, J.S. , Miller, R. , Patrick, A. , Pham, Q. , Piassek, M. , Rigaux, P. , Roymans, D. , Shareef, A. , Sharma, S. , Sutto-Ortiz, P. , Verheyen, N. , Vlijmen, H.V. , Ysebaert, N. , Yu, X.
Primary Citation of Related Structures: 8FU3
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA-directed RNA polymerase L | A | 2201 | Human Respiratory Syncytial Virus A2 | MGSWSHPQFEKGSGSGSSWSHPQFEKGSGSLVPRGSMDPIINGNSANVYLTDSYLKGVISFSECNALGSYIFNGPYLKNDYTNLISRQNPLIEHMNLKKLNITQSLISKYHKGEIKLEEPTYFQSLLMTYKSMTSSEQIATTNLLKKIIRRAIEISDVKVYAILNKLGLKEKDKIKSNNGQDEDNSVITTIIKDDILSAVKDNQSHLKADKNHSTKQKDTIKTTLLKKLMCSMQHPPSWLIHWFNLYTKLNNILTQYRSNEVKNHGFTLIDNQTLSGFQFILNQYGCIVYHKELKRITVTTYNQFLTWKDISLSRLNVCLITWISNCLNTLNKSLGLRCGFNNVILTQLFLYGDCILKLFHNEGFYIIKEVEGFIMSLILNITEEDQFRKRFYNSMLNNITDAANKAQKNLLSRVCHTLLDKTVSDNIINGRWIILLSKFLKLIKLAGDNNLNNLSELYFLFRIFGHPMVDERQAMDAVKINCNETKFYLLSSLSMLRGAFIYRIIKGFVNNYNRWPTLRNAIVLPLRWLTYYKLNTYPSLLELTERDLIVLSGLRFYREFRLPKKVDLEMIINDKAISPPKNLIWTSFPRNYMPSHIQNYIEHEKLKFSESDKSRRVLEYYLRDNKFNECDLYNCVVNQSYLNNPNHVVSLTGKERELSVGRMFAMQPGMFRQVQILAEKMIAENILQFFPESLTRYGDLELQKILELKAGISNKSNRYNDNYNNYISKCSIITDLSKFNQAFRYETSCICSDVLDELHGVQSLFSWLHLTIPHVTIICTYRHAPPYIGDHIVDLNNVDEQSGLYRYHMGGIEGWCQKLWTIEAISLLDLISLKGKFSITALINGDNQSIDISKPIRLMEGQTHAQADYLLALNSLKLLYKEYAGIGHKLKGTETYISRDMQFMSKTIQHNGVYYPASIKKVLRVGPWINTILDDFKVSLESIGSLTQELEYRGESLLCSLIFRNVWLYNQIALQLKNHALCNNKLYLDILKVLKHLKTFFNLDNIDTALTLYMNLPMLFGGGDPNLLYRSFYRRTPDFLTEAIVHSVFILSYYTNHDLKDKLQDLSDDRLNKFLTCIITFDKNPNAEFVTLMRDPQALGSERQAKITSEINRLAVTEVLSTAPNKIFSKSAQHYTTTEIDLNDIMQNIEPTYPHGLRVVYESLPFYKAEKIVNLISGTKSITNILEKTSAIDLTDIDRATEMMRKNITLLIRILPLDCNRDKREILSMENLSITELSKYVRERSWSLSNIVGVTSPSIMYTMDIKYTTSTISSGIIIEKYNVNSLTRGERGPTKPWVGSSTQEKKTMPVYNRQVLTKKQRDQIDLLAKLDWVYASIDNKDEFMEELSIGTLGLTYEKAKKLFPQYLSVNYLHRLTVSSRPCEFPASIPAYRTTNYHFDTSPINRILTEKYGDEDIDIVFQNCISFGLSLMSVVEQFTNVCPNRIILIPKLNEIHLMKPPIFTGDVDIHKLKQVIQKQHMFLPDKISLTQYVELFLSNKTLKSGSHVNSNLILAHKISDYFHNTYILSTNLAGHWILIIQLMKDSKGIFEKDWGEGYITDHMFINLKVFFNAYKTYLLCFHKGYGKAKLECDMNTSDLLCVLELIDSSYWKSMSKVFLEQKVIKYILSQDASLHRVKGCHSFKLWFLKRLNVAEFTVCPWVVNIDYHPTHMKAILTYIDLVRMGLINIDRIHIKNKHKFNDEFYTSNLFYINYNFSDNTHLLTKHIRIANSELENNYNKLYHPTPETLENILANPIKSNDKKTLNDYCIGKNVDSIMLPLLSNKKLIKSSAMIRTNYSKQDLYNLFPMVVIDRIIDHSGNTAKSNQLYTTTSHQISLVHNSTSLYCMLPWHHINRFNFVFSSTGCKISIEYILKDLKIKDPNCIAFIGEGAGNLLLRTVVELHPDIRYIYRSLKDCNDHSLPIEFLRLYNGHINIDYGENLTIPATDATNNIHWSYLHIKFAEPISLFVCDAELSVTVNWSKIIIEWSKHVRKCKYCSSVNKCMLIVKYHAQDDIDFKLDNITILKTYVCLGSKLKGSEVYLVLTIGPANIFPVFNVVQNAKLILSRTKNFIMPKKADKESIDANIKSLIPFLCYPITKKGINTALSKLKSVVSGDILSYSIAGRNEVFSNKLINHKHMNILKWFNHVLNFRSTELNYNHLYMVESTYPYLSELLNSLTTNELKKLIKITGSLLYNFHNE |
| Phosphoprotein | B | 256 | Human Respiratory Syncytial Virus A2 | MEKFAPEFHGEDANNRATKFLESIKGKFTSPKDPKKKDSIISVNSIDIEVTKESPITSNSTIINPTNETDDTAGNKPNYQRKPLVSFKEDPTPSDNPFSKLYKETIETFDNNEEESSYSYEEINDQTNDNITARLDRIDEKLSEILGMLHTLVVASAGPTSARDGIRDAMIGLREEMIEKIRTEALMTNDRLEAMARLRNEESEKMAKDTSDEVSLNPTSEKLNNLLEGNDSDNDLSLEDFKGENKYFQGHHHHHH |
| Phosphoprotein | C | 256 | Human Respiratory Syncytial Virus A2 | MEKFAPEFHGEDANNRATKFLESIKGKFTSPKDPKKKDSIISVNSIDIEVTKESPITSNSTIINPTNETDDTAGNKPNYQRKPLVSFKEDPTPSDNPFSKLYKETIETFDNNEEESSYSYEEINDQTNDNITARLDRIDEKLSEILGMLHTLVVASAGPTSARDGIRDAMIGLREEMIEKIRTEALMTNDRLEAMARLRNEESEKMAKDTSDEVSLNPTSEKLNNLLEGNDSDNDLSLEDFKGENKYFQGHHHHHH |
| Phosphoprotein | D | 256 | Human Respiratory Syncytial Virus A2 | MEKFAPEFHGEDANNRATKFLESIKGKFTSPKDPKKKDSIISVNSIDIEVTKESPITSNSTIINPTNETDDTAGNKPNYQRKPLVSFKEDPTPSDNPFSKLYKETIETFDNNEEESSYSYEEINDQTNDNITARLDRIDEKLSEILGMLHTLVVASAGPTSARDGIRDAMIGLREEMIEKIRTEALMTNDRLEAMARLRNEESEKMAKDTSDEVSLNPTSEKLNNLLEGNDSDNDLSLEDFKGENKYFQGHHHHHH |
| Phosphoprotein | E | 256 | Human Respiratory Syncytial Virus A2 | MEKFAPEFHGEDANNRATKFLESIKGKFTSPKDPKKKDSIISVNSIDIEVTKESPITSNSTIINPTNETDDTAGNKPNYQRKPLVSFKEDPTPSDNPFSKLYKETIETFDNNEEESSYSYEEINDQTNDNITARLDRIDEKLSEILGMLHTLVVASAGPTSARDGIRDAMIGLREEMIEKIRTEALMTNDRLEAMARLRNEESEKMAKDTSDEVSLNPTSEKLNNLLEGNDSDNDLSLEDFKGENKYFQGHHHHHH |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-01-16 Deposition Author(s): Abeywickrema, P. , Adhikary, S. , Behera, I. , Bhaumik, A. , Bonneux, B. , Bruyn, S.D. , Carbajo, R.J. , Decroly, E. , Fearns, R. , Fung, A. , Grosse, S. , Herschke, F. , Jacoby, E. , Jin, Z. , Jonckers, T.H.M. , Mclellan, J.S. , Miller, R. , Patrick, A. , Pham, Q. , Piassek, M. , Rigaux, P. , Roymans, D. , Shareef, A. , Sharma, S. , Sutto-Ortiz, P. , Verheyen, N. , Vlijmen, H.V. , Ysebaert, N. , Yu, X.