8EQM
Structure of a dimeric photosystem ii complex acclimated to far-red light
PDB DOI: 10.2210/pdb8eqm/pdb
Classification: PHOTOSYNTHESIS Organism(s): Caldicellulosiruptor Kronotskyensis
Deposited: 2022-10-08 Deposition Author(s): Amin, M. , Brudvig, G.W. , Bryant, D.A. , Flesher, D.A. , Gisriel, C.J. , Golbeck, J.H. , Kurashov, V. , Shen, G.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.6 Å
Structure of a dimeric photosystem ii complex acclimated to far-red light
Amin, M. , Brudvig, G.W. , Bryant, D.A. , Flesher, D.A. , Gisriel, C.J. , Golbeck, J.H. , Kurashov, V. , Shen, G.
Primary Citation of Related Structures: 8EQM
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Photosystem II protein D1 | A | 359 | Caldicellulosiruptor Kronotskyensis | MTTLIQRPNISQWERFCQWITSTENRLYIGWFGVLMLPLLGVSITVFVTAFIAAPPVDIDGIREPLSGSLLYGNNIITAAVVPTSNAIGLHFYPIWEAATLDEWLYNGGPYQMIAFHYIPALLCYLGREWELSYRLGMRPWICIAYSAPVAATISVFLIYPIGQGSFSDGLPMGISGTFNFMFVFQAEHNILMHPFHMLGVAGVLGGSLFCAMHGSLVTSSLVRETSDSQSQNEGYKFGQEEETYNILAAHGYFGRLIFQYASFNNSRQLHFFLAAWPVVCIWFVALGISTMAFNLNGFNFNHSVLDSQGRVLPSWADVVNRASLGFEVMHERNAHNFPLDLASGESVQVAMRAPHIGA |
| Photosystem II reaction center protein L | L | 40 | Caldicellulosiruptor Kronotskyensis | MADRPTNPNKQPVELNRTSLYLGLLVVFVTGLLFSSYFFN |
| Photosystem II reaction center protein M | M | 36 | Caldicellulosiruptor Kronotskyensis | METNKLGFVASVLFVFVPTVFLLILYIQTASKKTGT |
| Photosystem II manganese-stabilizing polypeptide | O | 274 | Caldicellulosiruptor Kronotskyensis | MIATVLVLTLGLLTACSGTKIAGDSLTYDDIRGSGLANDCPALTGTNMDAIPLEGSQPYQIRSLCLQPQTFLVETFPSVNGQLKKQAGRFVEGKLLTRSSFTLDQVSGQLQKASNGALTFVEQGGFDFQPVTVQIPNGDRVPLLFTVKGLVAKTAEAIDTIRPSTRFSGSFDVPPYRTSSFIDPKGRGLAVGYDAAVGIPIQADREAFSRQNNKSFKVGTGNIVLQVDRVNQSTGEISGSFESQQPSDTDFGSKPAMTVKILGQFYSRITPEIA |
| Photosystem II reaction center protein T | T | 32 | Caldicellulosiruptor Kronotskyensis | MEAVAYILIFACIIGTLFFAIAFREPPKITKD |
| Photosystem II 12 kDa extrinsic protein | U | 160 | Caldicellulosiruptor Kronotskyensis | MKLAIRKALGRWLVFGITLMIVQGFMLSGSSLSAMASPSNSNTAFFANGQINGITLLANAGGKDLRNTVDDKLATAYGSKIDVNNTNIAAFRKHRGLYPTIAGKVVSNAPYDSIEDILDIPGLREVEKDRLQKNMDIFTISDPVPALVEGADRFNNGVYK |
| Cytochrome c-550 | V | 172 | Caldicellulosiruptor Kronotskyensis | MKKVFQKFAWWMATFVFVAIGLFGAGPLVEGAIAAELDANLRTIPLNEAGDTVTLSLEEFTRGQQKFNNACAICHLGGITKTNPNVGLDTESLAGAFPDRNNLEGLVDYLHNPTTYDGLTEISELHPSTKSSDIYPKMRNLTEDDLRAISGHILLMPKIRGDQWGAGKTKSL |
| Photosystem II reaction center X protein | X | 39 | Caldicellulosiruptor Kronotskyensis | MTPSLTNFMLSLLAGLLIVVVPATIALIFISQRDQIRRG |
| Photosystem II CP47 reaction center protein | B | 509 | Caldicellulosiruptor Kronotskyensis | MGLPWYRVHTSVLNDPGRLIAVHIMHNALCAGFAGSMLLFELALFDPSDPVLNPMWRQGCFLMPFVSRLGVVNSWQGWSVTGETFTNPGFWTFETVAIAHIIFSGLSFLAACWHWVYWDVATFFDPKTDEPVIDLPKVFGIHLTLAGILCFGFGAFHLTGLFGPGMWVSDPLGLTGHIQGVAPEWGAAGFDPHNPGGVVAHHIALGIVAIIGGLFHIFVRPPEYLYKGLRMGNIEGTLASGLAVFFSGAFIAAGTMWYGTATTPIELWGPTRYQWDQGFFQQAISRQVKASISDGKSPSEAWSEIPTKLAFYDYIGNSPAKGGLFRVGRMVDGDGLPTGWLGHPVFKDGEGRELTVRRMPNFFENFPVVLFDQDGIVRADIPFRQAESKYGIEQTGVTVSFYGGELDGQTFSDPKDVKKYARRAQLGEPFEFDRSVYDSDGLFRTSNRGFFAFFHVIFGLLWFFGHIWHGLRALFQDVFSGIDPSLSAEQVEWGYFKKVGDPTSQQTPA |
| Photosystem II CP43 reaction center protein | C | 482 | Caldicellulosiruptor Kronotskyensis | METPLETIPDLSLSPTAEVGSILAPASPGYDEATSGYAWWAGNARLITPELTGRFLGAHVAHAGLVALWAGGMLLFEVSHFNLSKPMYEQGCILMPHIATLGIGVGQSGEITSMFPFFAIGVAHLIGSAVLGIGGMYHAIKGPEKLYGFFQFDWTDRAKVAQILGFHIAILGIFALLFAAKAMYWGGLYDPWAPGGGDVRLVTNPTLDPRIIFGYLIKRPTGGEGWIVSVNNLEDIIGGHIWIGCILIAGGIWHILVPPLRWTYNLFPWTGETYLSQSLGNVAGQAFIAAAFIWFNNTAYPSVFYGPTVPESSQAQSFVFLMRDQGMGADVASAQGPTGLGKYLQRSPTGEIIFGGETMRFWDARAPWLEPLRGKNGLDLDKLQHDVQPWQLRRAAEYMTHSPIGSLNSVAGLATESNAFNYVSPRTWLASAHFIFGFFFLVGHLWHAGRARAAAAGFETGLDREDEPVLSMAPIDPSLRSD |
| Photosystem II D2 protein | D | 352 | Caldicellulosiruptor Kronotskyensis | MTITMGSLGSARDWIKQLDDWLKRDRFVFIGWSGLLLFPCSFLAIGAWFTGTTFVTSWYTHGLVSSYLEGCNFLTVAVSTPAESMGHSLLLLWGPEASGDFVRWCQIGGLWTFTALHGVFGLIGFMLRQIEIARLVGIRPYNAIAFSAPIAVYCATFLIYPLGQSSWFFGPGFGVSAIFRFLLFFQGFHNYTLNPFHMMGVTGVLGGALLCAIHGATVQNTLFRDNQSKNTFKGFSTDQGEETYSMVTANRFWSQIFGIAFSNKRWLHFFMLFVPVTGLWMSAIGMAGLAFNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGLRAWLSEMDQPAKKFVFPDEVLPRGFSE |
| Cytochrome b559 subunit alpha | E | 80 | Caldicellulosiruptor Kronotskyensis | MAGVTGERPFGDIVTSVRYWIIHSITIPALFIAGWLFVSTGLAYDAFGTPRPNEYYPSNQMELPIVDDRYNPDRTLKYQD |
| Cytochrome b559 subunit beta | F | 44 | Caldicellulosiruptor Kronotskyensis | MTNIGREQPISYPIFTIRWLAIHALAIPSVFFLGSIAAMQFIQR |
| Photosystem II reaction center protein H | H | 66 | Caldicellulosiruptor Kronotskyensis | MRQKYVSNKAAPLQYPLRKLNSEAGKVVPGWGTAPLMGIMLIALLLFILTILQLYNGTVIVEGIDV |
| Photosystem II reaction center protein I | I | 38 | Caldicellulosiruptor Kronotskyensis | MVTLKIVVYLTVSFFVGLFIFGFLSGDPARNPSGRDFD |
| Photosystem II reaction center protein K | K | 45 | Caldicellulosiruptor Kronotskyensis | MDVAFLVAELPEAYRAFGPLIDVLPILPIFFLLLAFVWQASVGFR |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-10-08 Deposition Author(s): Amin, M. , Brudvig, G.W. , Bryant, D.A. , Flesher, D.A. , Gisriel, C.J. , Golbeck, J.H. , Kurashov, V. , Shen, G.