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8ELO

Crystal structure of sars-cov-2 spike protein receptor-binding domain in complex with antibody cc12.1 fab and nanobody nb-c4-225

PDB DOI: 10.2210/pdb8elo/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct

Deposited: 2022-09-26
Deposition Author(s): Liu, H. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.72 Å

8elo
Literature

Crystal structure of sars-cov-2 spike protein receptor-binding domain in complex with antibody cc12.1 fab and nanobody nb-c4-225

Liu, H. , Wilson, I.A.

Primary Citation of Related Structures: 8ELO


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 A 205 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSGHHHHHH
Nanobody Nb-C4-225 B 140 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct EVQLQESGGGLVQPGGSLRLSCAASGFTFSSYAMGWYRQAPGKEREWVCAISGSGGSTYYADSVKGRFTCSRDNSKNTLYLQMNSLKPEDTAVYYCARGSFYYTYGGSVGFDAFDYWGQGTQVTVSSGSGHHHHHHHHHH
CC12.1 Fab heavy chain H 220 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct EVQLVESGGGLIQPGGSLRLSCAASGLTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLDVYGLDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
CC12.1 Fab light chain L 217 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct DIVMTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPPKFTFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-09-26
Deposition Author(s): Liu, H. , Wilson, I.A.