Structure of lates calcarifer twinkle helicase with atp and dna
PDB DOI: 10.2210/pdb8e2l/pdb
Classification: REPLICATION/DNA Organism(s): Lates Calcarifer , Synthetic Construct
Deposited: 2022-08-15 Deposition Author(s): Gao, Y. , Li, Z.
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Twinkle mtDNA helicase | C | 542 | Lates Calcarifer , Synthetic Construct | MQKEEQDFLSPHVMLGYPESLDEQEEGERELREVQRIWSSAVPFNDLPEDEAQLIKTMFQITKVSNATLKKFGVRLFKPTKSLVFPWFAGPDSSLKGLKLLSAQNTDTEKVTYNEATVPKISSYYNLFGLTLVGRMDSEVVLTGHELDTLAVSQATGLPSVALPRGVSCLPPMLLPYLEQFKRVTLWLGHDIRSWEASKIFSRKLGLRRCSLVRPGEDRPCPLEALARGKNLSRIIKTSIPAAHKSIVSFKQLREDVYGELLNTEQVAGVKWTRFPELNRILKGHRKGELTVFTGPTGSGKTTFISEVALDLCIQGVNTLWGSFQINNVRLAKIMLTQFAMQRLEENLEQYDFWADKFEELPLYFMTFHGQQNIKTVLDTMQHAVYLYDINHVIIDNLQFMMGQENLSIDKYAVQDHIIGAFRKFATNTSCHVTLIIHPRKEEDDRELQTASIFGSAKASQEADNVLILQEKKLVTCPGRRSLQVTKNRFDGDVGIFPLDFIKSSLTFSAPIKGKVKLRKVSTKPENEEVGGERGGSEEGRG |
| Twinkle mtDNA helicase | A | 542 | Lates Calcarifer , Synthetic Construct | MQKEEQDFLSPHVMLGYPESLDEQEEGERELREVQRIWSSAVPFNDLPEDEAQLIKTMFQITKVSNATLKKFGVRLFKPTKSLVFPWFAGPDSSLKGLKLLSAQNTDTEKVTYNEATVPKISSYYNLFGLTLVGRMDSEVVLTGHELDTLAVSQATGLPSVALPRGVSCLPPMLLPYLEQFKRVTLWLGHDIRSWEASKIFSRKLGLRRCSLVRPGEDRPCPLEALARGKNLSRIIKTSIPAAHKSIVSFKQLREDVYGELLNTEQVAGVKWTRFPELNRILKGHRKGELTVFTGPTGSGKTTFISEVALDLCIQGVNTLWGSFQINNVRLAKIMLTQFAMQRLEENLEQYDFWADKFEELPLYFMTFHGQQNIKTVLDTMQHAVYLYDINHVIIDNLQFMMGQENLSIDKYAVQDHIIGAFRKFATNTSCHVTLIIHPRKEEDDRELQTASIFGSAKASQEADNVLILQEKKLVTCPGRRSLQVTKNRFDGDVGIFPLDFIKSSLTFSAPIKGKVKLRKVSTKPENEEVGGERGGSEEGRG |
| Twinkle mtDNA helicase | B | 542 | Lates Calcarifer , Synthetic Construct | MQKEEQDFLSPHVMLGYPESLDEQEEGERELREVQRIWSSAVPFNDLPEDEAQLIKTMFQITKVSNATLKKFGVRLFKPTKSLVFPWFAGPDSSLKGLKLLSAQNTDTEKVTYNEATVPKISSYYNLFGLTLVGRMDSEVVLTGHELDTLAVSQATGLPSVALPRGVSCLPPMLLPYLEQFKRVTLWLGHDIRSWEASKIFSRKLGLRRCSLVRPGEDRPCPLEALARGKNLSRIIKTSIPAAHKSIVSFKQLREDVYGELLNTEQVAGVKWTRFPELNRILKGHRKGELTVFTGPTGSGKTTFISEVALDLCIQGVNTLWGSFQINNVRLAKIMLTQFAMQRLEENLEQYDFWADKFEELPLYFMTFHGQQNIKTVLDTMQHAVYLYDINHVIIDNLQFMMGQENLSIDKYAVQDHIIGAFRKFATNTSCHVTLIIHPRKEEDDRELQTASIFGSAKASQEADNVLILQEKKLVTCPGRRSLQVTKNRFDGDVGIFPLDFIKSSLTFSAPIKGKVKLRKVSTKPENEEVGGERGGSEEGRG |
| Twinkle mtDNA helicase | D | 542 | Lates Calcarifer , Synthetic Construct | MQKEEQDFLSPHVMLGYPESLDEQEEGERELREVQRIWSSAVPFNDLPEDEAQLIKTMFQITKVSNATLKKFGVRLFKPTKSLVFPWFAGPDSSLKGLKLLSAQNTDTEKVTYNEATVPKISSYYNLFGLTLVGRMDSEVVLTGHELDTLAVSQATGLPSVALPRGVSCLPPMLLPYLEQFKRVTLWLGHDIRSWEASKIFSRKLGLRRCSLVRPGEDRPCPLEALARGKNLSRIIKTSIPAAHKSIVSFKQLREDVYGELLNTEQVAGVKWTRFPELNRILKGHRKGELTVFTGPTGSGKTTFISEVALDLCIQGVNTLWGSFQINNVRLAKIMLTQFAMQRLEENLEQYDFWADKFEELPLYFMTFHGQQNIKTVLDTMQHAVYLYDINHVIIDNLQFMMGQENLSIDKYAVQDHIIGAFRKFATNTSCHVTLIIHPRKEEDDRELQTASIFGSAKASQEADNVLILQEKKLVTCPGRRSLQVTKNRFDGDVGIFPLDFIKSSLTFSAPIKGKVKLRKVSTKPENEEVGGERGGSEEGRG |
| Twinkle mtDNA helicase | E | 542 | Lates Calcarifer , Synthetic Construct | MQKEEQDFLSPHVMLGYPESLDEQEEGERELREVQRIWSSAVPFNDLPEDEAQLIKTMFQITKVSNATLKKFGVRLFKPTKSLVFPWFAGPDSSLKGLKLLSAQNTDTEKVTYNEATVPKISSYYNLFGLTLVGRMDSEVVLTGHELDTLAVSQATGLPSVALPRGVSCLPPMLLPYLEQFKRVTLWLGHDIRSWEASKIFSRKLGLRRCSLVRPGEDRPCPLEALARGKNLSRIIKTSIPAAHKSIVSFKQLREDVYGELLNTEQVAGVKWTRFPELNRILKGHRKGELTVFTGPTGSGKTTFISEVALDLCIQGVNTLWGSFQINNVRLAKIMLTQFAMQRLEENLEQYDFWADKFEELPLYFMTFHGQQNIKTVLDTMQHAVYLYDINHVIIDNLQFMMGQENLSIDKYAVQDHIIGAFRKFATNTSCHVTLIIHPRKEEDDRELQTASIFGSAKASQEADNVLILQEKKLVTCPGRRSLQVTKNRFDGDVGIFPLDFIKSSLTFSAPIKGKVKLRKVSTKPENEEVGGERGGSEEGRG |
| Twinkle mtDNA helicase | F | 542 | Lates Calcarifer , Synthetic Construct | MQKEEQDFLSPHVMLGYPESLDEQEEGERELREVQRIWSSAVPFNDLPEDEAQLIKTMFQITKVSNATLKKFGVRLFKPTKSLVFPWFAGPDSSLKGLKLLSAQNTDTEKVTYNEATVPKISSYYNLFGLTLVGRMDSEVVLTGHELDTLAVSQATGLPSVALPRGVSCLPPMLLPYLEQFKRVTLWLGHDIRSWEASKIFSRKLGLRRCSLVRPGEDRPCPLEALARGKNLSRIIKTSIPAAHKSIVSFKQLREDVYGELLNTEQVAGVKWTRFPELNRILKGHRKGELTVFTGPTGSGKTTFISEVALDLCIQGVNTLWGSFQINNVRLAKIMLTQFAMQRLEENLEQYDFWADKFEELPLYFMTFHGQQNIKTVLDTMQHAVYLYDINHVIIDNLQFMMGQENLSIDKYAVQDHIIGAFRKFATNTSCHVTLIIHPRKEEDDRELQTASIFGSAKASQEADNVLILQEKKLVTCPGRRSLQVTKNRFDGDVGIFPLDFIKSSLTFSAPIKGKVKLRKVSTKPENEEVGGERGGSEEGRG |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3') | m | 15 | NA | TTTTTTTTTTTTTTT |
Method: ELECTRON MICROSCOPY