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FASTA Sequence PDB Format mmCIF Format
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8DK9

Sliding-clamp-dinx peptide

PDB DOI: 10.2210/pdb8dk9/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Roseivivax Halodurans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2022-07-05
Deposition Author(s): Gray, O.J. , Honzatko, R.H. , Kapur, M.K. , Nelson, S.N.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.5 Å

8dk9
Literature

Sliding-clamp-dinx peptide

Gray, O.J. , Honzatko, R.H. , Kapur, M.K. , Nelson, S.N.

Primary Citation of Related Structures: 8DK9


Proteins
Molecule Chains Sequence Length Organism Sequence
Beta sliding clamp A 397 Roseivivax Halodurans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MATTTVGLTDLKVRLVRDDFADAVAWVARSLPSRPTVPVLAGVLLTGSDDGLTISSFDYEVSAEVQIPAEIAAPGTVLVSGRLLSEITRALPNKPVDLSVEGTRVSLTCGSARFSLPTMAVEDYPALPELPAETGSVPADLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGDRMVLAATDRFRLAVRELTWTTKTPDVEAAVLVPAKTLAEAAKTGLDGSEVQLALGAGPSVGQDGLLGIRSEGKRSTTRLLDAEFPKFRQLLPTEHTAMATIGVGELTEAIKRVALVADRGAQVRMEFADDVLHLSAGADDVGRAEEDLPVSFSGEPLTIAFNPGYLTDGLGALHSERVTFGFTTPSKPAVLRPATEADAALNGNGPFPAAETDYVYLLMPVRLPG
Beta sliding clamp B 397 Roseivivax Halodurans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MATTTVGLTDLKVRLVRDDFADAVAWVARSLPSRPTVPVLAGVLLTGSDDGLTISSFDYEVSAEVQIPAEIAAPGTVLVSGRLLSEITRALPNKPVDLSVEGTRVSLTCGSARFSLPTMAVEDYPALPELPAETGSVPADLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGDRMVLAATDRFRLAVRELTWTTKTPDVEAAVLVPAKTLAEAAKTGLDGSEVQLALGAGPSVGQDGLLGIRSEGKRSTTRLLDAEFPKFRQLLPTEHTAMATIGVGELTEAIKRVALVADRGAQVRMEFADDVLHLSAGADDVGRAEEDLPVSFSGEPLTIAFNPGYLTDGLGALHSERVTFGFTTPSKPAVLRPATEADAALNGNGPFPAAETDYVYLLMPVRLPG
Beta sliding clamp C 397 Roseivivax Halodurans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MATTTVGLTDLKVRLVRDDFADAVAWVARSLPSRPTVPVLAGVLLTGSDDGLTISSFDYEVSAEVQIPAEIAAPGTVLVSGRLLSEITRALPNKPVDLSVEGTRVSLTCGSARFSLPTMAVEDYPALPELPAETGSVPADLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGDRMVLAATDRFRLAVRELTWTTKTPDVEAAVLVPAKTLAEAAKTGLDGSEVQLALGAGPSVGQDGLLGIRSEGKRSTTRLLDAEFPKFRQLLPTEHTAMATIGVGELTEAIKRVALVADRGAQVRMEFADDVLHLSAGADDVGRAEEDLPVSFSGEPLTIAFNPGYLTDGLGALHSERVTFGFTTPSKPAVLRPATEADAALNGNGPFPAAETDYVYLLMPVRLPG
Beta sliding clamp D 397 Roseivivax Halodurans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MATTTVGLTDLKVRLVRDDFADAVAWVARSLPSRPTVPVLAGVLLTGSDDGLTISSFDYEVSAEVQIPAEIAAPGTVLVSGRLLSEITRALPNKPVDLSVEGTRVSLTCGSARFSLPTMAVEDYPALPELPAETGSVPADLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGDRMVLAATDRFRLAVRELTWTTKTPDVEAAVLVPAKTLAEAAKTGLDGSEVQLALGAGPSVGQDGLLGIRSEGKRSTTRLLDAEFPKFRQLLPTEHTAMATIGVGELTEAIKRVALVADRGAQVRMEFADDVLHLSAGADDVGRAEEDLPVSFSGEPLTIAFNPGYLTDGLGALHSERVTFGFTTPSKPAVLRPATEADAALNGNGPFPAAETDYVYLLMPVRLPG
DNA polymerase IV 1 peptide E 6 Roseivivax Halodurans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) QESLFA
DNA polymerase IV 1 peptide F 6 Roseivivax Halodurans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) QESLFA
DNA polymerase IV 1 peptide G 6 Roseivivax Halodurans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) QESLFA
DNA polymerase IV 1 peptide H 6 Roseivivax Halodurans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) QESLFA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-07-05
Deposition Author(s): Gray, O.J. , Honzatko, R.H. , Kapur, M.K. , Nelson, S.N.