8CX0
Cryo-em structure of human apobec3g/hiv-1 vif/cbfbeta/elob/eloc monomeric complex
PDB DOI: 10.2210/pdb8cx0/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM/RNA Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1 , Spodoptera Frugiperda
Deposited: 2022-05-19 Deposition Author(s): Azumaya, C.M. , Cheng, Y. , Chesarino, N.M. , Echeverria, I. , Emerman, M. , Gross, J.D. , Langley, C. , Li, Y.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.7 Å
Cryo-em structure of human apobec3g/hiv-1 vif/cbfbeta/elob/eloc monomeric complex
Azumaya, C.M. , Cheng, Y. , Chesarino, N.M. , Echeverria, I. , Emerman, M. , Gross, J.D. , Langley, C. , Li, Y.
Primary Citation of Related Structures: 8CX0
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA dC->dU-editing enzyme APOBEC-3G | A | 421 | Homo Sapiens , Human Immunodeficiency Virus 1 , Spodoptera Frugiperda | MKPHFRNTVERMYRDTFSYNFYNRPILSRRNTVWLCYEVKTKGPSRPPLDAKIFRGQVYSELKYHPEMRFFHWFSKWRKLHRDQEYEVTWYISWSPCTKCTRDMATFLAEDPKVTLTIFVARLYYFWDPDYQEALRSLCQKRDGPRATMKIMNYDEFQHCWSKFVYSQRELFEPWNNLPKYYILLHIMLGEILRHSMDPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVLLNQRRGFLCNQAPHKHGFLEGRHAELCFLDVIPFWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIFTARIYDDQGRCQEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGCPFQPWDGLDEHSQDLSGRLRAILQNQENGSSLEGGGGWSHPQFEKGGGSGGGSGGGSWSHPQFEK |
| Virion infectivity factor | B | 192 | Homo Sapiens , Human Immunodeficiency Virus 1 , Spodoptera Frugiperda | MENRWQVMIVWQVDRMRIRTWKSLVKHHMYVSGKARGWFYRHHYESPHPRISSEVHIPLGDARLVITTYWGLHTGERDWHLGQGVSIEWRKKRYSTQVDPELADQLIHLYYFDCFSDSAIRKALLGHIVSPRCEYQAGHNKVGSLQYLALAALITPKKIKPPLPSVTKLTEDRWNKPQKTKGHRGSHTMNGH |
| Core-binding factor subunit beta | C | 182 | Homo Sapiens , Human Immunodeficiency Virus 1 , Spodoptera Frugiperda | MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLSLQFFPASWQGEQRQTPSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLQRLDGMGCLEFDEERAQQEDALAQQAFEEARRRTREFEDRDRSHREEMEVRVSQLLAVTGKKTTRP |
| Elongin-B | D | 118 | Homo Sapiens , Human Immunodeficiency Virus 1 , Spodoptera Frugiperda | MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMKPQDSGSSANEQAVQ |
| Elongin-C | E | 112 | Homo Sapiens , Human Immunodeficiency Virus 1 , Spodoptera Frugiperda | MDGEEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*A)-3') | k | 8 | NA | AAAAAAAA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-05-19 Deposition Author(s): Azumaya, C.M. , Cheng, Y. , Chesarino, N.M. , Echeverria, I. , Emerman, M. , Gross, J.D. , Langley, C. , Li, Y.