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FASTA Sequence PDB Format mmCIF Format
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8CWV

Crystal structure of sars-cov-2 spike protein receptor-binding domain in complex with a cross-neutralizing nanobody 2-31 and a human antibody cc12.1 fab

PDB DOI: 10.2210/pdb8cwv/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2022-05-19
Deposition Author(s): Liu, H. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.51 Å

8cwv
Literature

Crystal structure of sars-cov-2 spike protein receptor-binding domain in complex with a cross-neutralizing nanobody 2-31 and a human antibody cc12.1 fab

Liu, H. , Wilson, I.A.

Primary Citation of Related Structures: 8CWV


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 A 205 Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSGHHHHHH
VHH 2-31 B 156 Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 MASMTGGQQMGRDPNSQVQLVESGGGLVQAGESLRLSCAASKPTFRNFAAGWFRQTPGKDREFVAVIEYDGDSAYYADSVKGRFTISRDNAKNTVYLQMNRLKPGDTAVYICAIGGNHYDPSKYYTADEYDYWGQGTQVTVSSKLAAALEHHHHHH
CC12.1 Fab heavy chain H 220 Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 EVQLVESGGGLIQPGGSLRLSCAASGLTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLDVYGLDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
CC12.1 Fab light chain L 217 Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 DIVMTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPPKFTFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-05-19
Deposition Author(s): Liu, H. , Wilson, I.A.