Fab arms of antibodies 4c12-b12 and cr3022 bound to pangolin receptor binding domain (prbd)
PDB DOI: 10.2210/pdb8cwj/pdb
Classification: IMMUNE SYSTEM Organism(s): Homo Sapiens , Pangolin Coronavirus
Deposited: 2022-05-19 Deposition Author(s): Christ, D. , Langley, D.B.
Fab arms of antibodies 4c12-b12 and cr3022 bound to pangolin receptor binding domain (prbd)
Primary Citation of Related Structures: 8CWJ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Heavy chain of CR3022 antibody Fab | H | 230 | Homo Sapiens , Pangolin Coronavirus | QMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGISTPMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH |
| Heavy chain of CR3022 antibody Fab | A | 230 | Homo Sapiens , Pangolin Coronavirus | QMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGISTPMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH |
| Light chain of CR3022 antibody Fab | L | 220 | Homo Sapiens , Pangolin Coronavirus | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| Light chain of CR3022 antibody Fab | B | 220 | Homo Sapiens , Pangolin Coronavirus | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| Spike glycoprotein | G | 204 | Homo Sapiens , Pangolin Coronavirus | TNLCPFGEVFNATTFASVYAWNRKRISNCVADYSVLYNSTSFSTFKCYGVSPTKLNDLCFTNVYADSFVVRGDEVRQIAPGQTGRIAGYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFHPTNGVGYQPYRVVVLSFELLNAPATVCGPKGSHHHHHH |
| Spike glycoprotein | I | 204 | Homo Sapiens , Pangolin Coronavirus | TNLCPFGEVFNATTFASVYAWNRKRISNCVADYSVLYNSTSFSTFKCYGVSPTKLNDLCFTNVYADSFVVRGDEVRQIAPGQTGRIAGYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFHPTNGVGYQPYRVVVLSFELLNAPATVCGPKGSHHHHHH |
| Heavy chain of 4C12-B12 antibody Fab | J | 230 | Homo Sapiens , Pangolin Coronavirus | EVQLLESGGGLVQPGGSLRLSCAASGFRISDEDMGWVRQAPGKGLEWVSYIDNAGASTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKSHYANPSFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH |
| Heavy chain of 4C12-B12 antibody Fab | U | 230 | Homo Sapiens , Pangolin Coronavirus | EVQLLESGGGLVQPGGSLRLSCAASGFRISDEDMGWVRQAPGKGLEWVSYIDNAGASTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKSHYANPSFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH |
| Light chain of 4C12-B12 antibody Fab | K | 215 | Homo Sapiens , Pangolin Coronavirus | DIQMTQSPSSLSASVGDRVTITCRASQDIADYLNWYQQKPGKAPKLLIYYASNLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGLGMPITFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS |
| Light chain of 4C12-B12 antibody Fab | V | 215 | Homo Sapiens , Pangolin Coronavirus | DIQMTQSPSSLSASVGDRVTITCRASQDIADYLNWYQQKPGKAPKLLIYYASNLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGLGMPITFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS |
Method: X-RAY DIFFRACTION
Deposited Date: 2022-05-19 Deposition Author(s): Christ, D. , Langley, D.B.