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8CTY

12-mer dna structure of exbim bound to rnase-h

PDB DOI: 10.2210/pdb8cty/pdb

Classification: DNA
Organism(s): Halalkalibacterium Halodurans , Synthetic Construct

Deposited: 2022-05-16
Deposition Author(s): Egli, M. , Pallan, P.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.3 Å

8cty
Literature

12-mer dna structure of exbim bound to rnase-h

Egli, M. , Pallan, P.S.

Primary Citation of Related Structures: 8CTY


Proteins
Molecule Chains Sequence Length Organism Sequence
Ribonuclease H A 142 Halalkalibacterium Halodurans , Synthetic Construct GSHMAKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQTAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYGRK
Ribonuclease H B 142 Halalkalibacterium Halodurans , Synthetic Construct GSHMAKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQTAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYGRK
Ribonuclease H C 142 Halalkalibacterium Halodurans , Synthetic Construct GSHMAKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQTAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYGRK
Ribonuclease H D 142 Halalkalibacterium Halodurans , Synthetic Construct GSHMAKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQTAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYGRK
Ribonuclease H E 142 Halalkalibacterium Halodurans , Synthetic Construct GSHMAKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQTAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYGRK
Ribonuclease H F 142 Halalkalibacterium Halodurans , Synthetic Construct GSHMAKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQTAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYGRK
Ribonuclease H G 142 Halalkalibacterium Halodurans , Synthetic Construct GSHMAKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQTAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYGRK
Ribonuclease H H 142 Halalkalibacterium Halodurans , Synthetic Construct GSHMAKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQTAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYGRK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(OWR)P*GP*CP*G)-3') i 12 NA CGCGAATTXGCG
DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(OWR)P*GP*CP*G)-3') j 12 NA CGCGAATTXGCG
DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(OWR)P*GP*CP*G)-3') k 12 NA CGCGAATTXGCG
DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(OWR)P*GP*CP*G)-3') l 12 NA CGCGAATTXGCG
DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(OWR)P*GP*CP*G)-3') m 12 NA CGCGAATTXGCG
DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(OWR)P*GP*CP*G)-3') n 12 NA CGCGAATTXGCG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-05-16
Deposition Author(s): Egli, M. , Pallan, P.S.