8CMO
Cryo-em structure of the photosystem i - lhci supercomplex from coelastrella sp.
PDB DOI: 10.2210/pdb8cmo/pdb
Classification: PHOTOSYNTHESIS Organism(s): Coelastrella
Deposited: 2023-02-20 Deposition Author(s): Fadeeva, M. , Klaiman, D. , Nelson, N.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.81 Å
Cryo-em structure of the photosystem i - lhci supercomplex from coelastrella sp.
Fadeeva, M. , Klaiman, D. , Nelson, N.
Primary Citation of Related Structures: 8CMO
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Photosystem I P700 chlorophyll a apoprotein A1 PsaA | A | 740 | Coelastrella | KKVKIAVDRNPVETSFEKWAKPGHFSRTLSKGPNTTTWIWNLHADAHDFDSHTSDLEEISRKVFSAHFGQLGVIFIWLSGMYFHGARFSNYEAWLSDPVHIKPSAQVVWPVVGQEILNGDVGGGFQGIQITSGFFQLWRASGITSELQLYTTAIGGLVMAAAMFFAGWFHYHKAAPKLEWFQNVESMLNHHLAGLLGLGSLSWAGHQIHVSLPVNKLLDAGVDPKEIPLPHEFLLNRQIMQDLYPSFAKGLAPFFTLQWGEYSDFLTFNGGLNPVTGGLWLSDTAHHHLAIAVLFLVAGHMYRTNWGIGHSMKEILEAHKGPFTGEGHVGLYEILTTSWHAQLAINLALFGSLSIIVAHHMYSMPPYPYLATDYGTQLSLFTHHNWIGGFCIVGAGAHAAIFMVRDYDPTNNYNNLLDRVIRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQKTHFLAPQLTAPTALAATSATWGGDVVAVGGKVAMMPISLGTSDFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSLSIAIFHFSWKMQSDVWGTVTASGVSHITGGNFAQSANTINGWLRDFLWAQSSQVIQSYGSALSAYGLMFLGAHFVWAFSLMFLFSGRGYWQELIESIIWAHSKLKVAPSIQPRALSITQGRAVGVAHYLLGGIATTWSFFLARIIAV |
| Photosystem I reaction center subunit X psaK | K | 89 | Coelastrella | RADGFIGSTTNLIMVASTAAFLAAGKFGLAPTVKRGTDAACKLVDRPNAAGLISNDPSGFTAVDTLAFGALGHIAGVGIVLGLRATGNL |
| Photosystem I reaction centre subunit XI PsaL | L | 123 | Coelastrella | MLETPVTSTPEVASYLSNLPAYRTGVAPLLRGVEIGRAHGFFLPGPFIKLGPLRNVEGAAEIAGCLSAAGLVIILAAALSIYGSAMFQGEPRDPLQSAEGWNEFTSGFTVGALSGVAWAFACT |
| Light-harvesting protein of photosystem I Lhca1 | 1 | 194 | Coelastrella | RAGNWLPGSDAPAWLPDDLPGNYGFDPLGLCKDPASLKRFTESEVIHCRWAMLGAAGCLGVEALGFGNWYDAPLWAINGGSPTWFGISVPFDLNTLLAVEFVAMAAAESRRGDETDAAKRIYPGGAFDPLNFAKGDIETLKLKEIKNGRLAMMACLGFVAQHAATGKTPLQALGDHIGNPWGSNFATNGVSLPF |
| Light-harvesting protein of photosystem I Lhca1 | Z | 194 | Coelastrella | RAGNWLPGSDAPAWLPDDLPGNYGFDPLGLCKDPASLKRFTESEVIHCRWAMLGAAGCLGVEALGFGNWYDAPLWAINGGSPTWFGISVPFDLNTLLAVEFVAMAAAESRRGDETDAAKRIYPGGAFDPLNFAKGDIETLKLKEIKNGRLAMMACLGFVAQHAATGKTPLQALGDHIGNPWGSNFATNGVSLPF |
| Light-harvesting protein of photosystem I Lhca3 | 3 | 218 | Coelastrella | QLYFTSESTLQYLDGTLPGDFGFDPLGLLDPVNSGGFVTPQWLAYSEVIHCRWAMLGAAGCIAPEILGKAGVGVDIRWFETGVIPPAGTYDKYWTDPYSLFFIEVIAMQFAELRRWQDFKYPGSMSKQYFVGLEAVQGGSGDPAYPGGPWFNLFNLGAKSEADMKKLKLNEIKNGRLAMLAVFGYGAQAVLTGKGPYENLLDHLADPVNNNILTNFGK |
| Light-harvesting protein of photosystem I Lhca7 | 7 | 220 | Coelastrella | AYGPDRPLWYPGNPAPAYLDGTLAGDYGFDPLGLSSDPETMRWMVHAELQNARWAMLGAAGVLLTSIGAAVGLPFPEWYEAGAAPLPSTVHGDWSFGTLTATMFLLFHWAEQKRIMDFRNPGSQGDGSFFGITDDFKSKENGYPGGRLFDPIGFSRGDEAMYKKYKQNEIVNGRLAMVANLGFWAQYAATGKGPIQNLADHLADPYHTTFTTNGVSVPFY |
| Light-harvesting protein of photosystem I Lhca8 | 8 | 214 | Coelastrella | RPLWMPGATVPAHLKGELAGDFGFDPLNLGKDPQALRWYQQAELVHGRTAMTAVAGILIPGLLTKAGVLNVPEWYEAGKVSAEQTGIALGPLLAVQLFMCGFVEGKRWMDFLKPGSQSEAGSFLGFEASFKGTDNGYPGGPFDPMGMCNESEAKTKDLKLKEIKNGRLAMLACLGFAAQYGATGKGPLDNLADHLAAPLKTTFVDNGISIPIHL |
| Light-harvesting protein of photosystem I Lhca4 | 4 | 207 | Coelastrella | ANRPSWFPGSKFPAHLDGTLPGDHGFDPLSLGVDPAKLKWYQQAELQNGRWAMLGAAGILVPDLLRAVGMGGPAAQVPWFEAGKYEYFAPPSALFASMMFLFAFVEFRRLQDIRKPGSANQDPIFTNNKLPAGEVGYPGGIFDPLGYSKGNMETLKLKEIKNARLAMLGFAGFVAQYQTTGKTPLQNLSDHLANPWSTTVLSNDLAR |
| Light-harvesting protein of photosystem I Lhca5 | 5 | 226 | Coelastrella | DRKLWAPTVDSPSYLNGELAGDYGFDPLGLGADPVALKWYRQSELVHARWAMLGVAGVLGQEILRPDVFWYEAGEPQNLPGPFQNINMGGLLAWEFLLMHWVEVRRWQDYKNFGSVNEDPIFKGNKVPNPEMGYPGGIFDPLGFSKGNRKELQTKEIKNGRIAMIAFMSFVVQAQATGKGPLANLADHLSNPGANNWVSNINHCVTPSSVDVQGLTIPLTCLWPGS |
| Light-harvesting protein of photosystem I Lhca6 | 6 | 226 | Coelastrella | RPLWRPGSAPPAHLNGELPGDFGFDPLGLGANPESLKWFAESERVHARWAMLAVAGILVQEVVKPDVFWYDAPTKIDLPFNIVGLLAFEFFAMHFVELKRWQDFRNPGSVDADPLFPSNKLAPHEVGYPGFAPFVPGPMEELKVKEIKNGRLAMLAFIGFTMAAQVTGKGPLAALSEHLADPMGTTIFSKAVVVPGQVVQPECKIPQFTDFQGTKIFTPCLFQGLW |
| Light-harvesting protein of photosystem I Lhca9 | 9 | 184 | Coelastrella | RPTWLPNLNPPAHLKGEMAGDFGFDPLGLGADPARLKWFAEAEKTNGRWAMMAVVGILGQELLGVQPSWWNAGAKDYGVAMGPLTAMEFLIMGFLETKRYQGFKETGSSGLINQFPFDPAGMYSKDMAVKEVKNGRLAMVAFVGFAVQALASRTGPIEGLTKHLSNPGYNITYNLTHLQDVNTY |
| Photosystem I P700 chlorophyll a apoprotein A2 PsaB | B | 732 | Coelastrella | ATKLFPKFSQGLAQDPTTRRIWFGLAVAHDFESHDGMTEENLYQKIFASHFGQLAIIFLWTSGNLFHVAWQGNFEQWGADPIHVRPIAHAIWDPHFGQPAVEAFTRGGASGPVNISTSGVYQWWYTIGMRTNQDLYVGSVFLALVSAIFLFASWLHLQPSFTPSLSWFKDAESRLNHHLSGLFGVSSLAWTGHLVHVAIPESRGKHVGWDNFLTQLPHPQGLTPFWTGNWAAYAQNPDSASHVFGTSDGAGEAILTFLGGFHPQTQSLWLTDMAHHHLAIAVIFIVAGHMYRTNFGIGHRMSAILDAHVAPSGRLGAGHKGLFETVNNSLHFQLGLALASVGTICSLVAQHMYSLPPYAFLANDFTTQASLYTHHQYIAGFIMCGAFAHGAIFWIRDYDPEQNKGNVLARMLDHKEAIISHLSWVSLFLGFHTLGLYVHNDVMQAFGTPEKQILIEPVFAQWIQAAHGKAFYGFDLLLSSSSSSAASASQTLWLPGWLDAINNNQNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAYDAFYLAVFWMLNTIGWVTFYFHWKHLTLWQGNVSQFDESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWIFLFGHLVYATGFMFLISWRGYWQELIETLVWAHEKTPLANLVYWKDKPVALSIVQARLVGLTHFSVGYVFTYAAFLIASTSGK |
| Light-harvesting protein of photosystem I Lhca2 partial | 2 | 70 | Coelastrella | GRLAMLAFIGFCSQAAVRGKGPIDCLKDHIADPWNNNIYTSSVGKETCVTVALLCVWPIIIEATKSLNKG |
| Photosystem I subunit VII PsaC | C | 80 | Coelastrella | SHIVKIYDTCIGCTQCVRACPLDVLEMVPWNGCKANQMASAPRTEDCVGCKRCETACPTDFLSVRVYLGSESTRSMGLSY |
| Photosystem I reaction center subunit II PsaD | D | 142 | Coelastrella | WTEPTLNPDTPSPIFGGSTGGLLRKAQVEEFYVITWESNKEQIFEMPTGGAAIMRKGPNLLKFARKEQCLALTTQLRTKFKFTPCFYRVYPSGEVQYLHPKDGVYPEKVNAGRPGVNQNFRRIGENVNPIKVKFTGNGTMDI |
| Photosystem I reaction center subunit IV PsaE | E | 61 | Coelastrella | VGPKRGSQVKILRPESYWYNQTGKVVSVDQSGILYPVVVRFETQNYAGVTTNNFALDEVQP |
| Photosystem I reaction center subunit III PsaF | F | 165 | Coelastrella | DIAGLTPCSESAAYAKRLKNEVKGLNKRLKNYEADSAPAIALKATIERTQNRFANYAKAGLLCGADGLPHLISDPGLALKYGHAGEVFIPTFGFLYVAGWIGYVGRLYLNMVKGEAKPTEKEIIIDVPAALRLTWQGATWPVQVVAELRANTLTEKAENITISPR |
| Photosystem I reaction center subunit V PsaG | G | 93 | Coelastrella | GLEPYLQVCAGTATMLAVGRFAFLPLHRRDLERSAATAGPKTTGSTYFDSLQQEASFITSTNDPAGFTLIDTMAWGALGHALGFAFLAASSLQ |
| Photosystem I reaction center subunit VIII PsaI | I | 41 | Coelastrella | AAGSYPFVPPSWAPSVFVPLTGLVLPAIAMATLFVYIEKDN |
| Photosystem I subunit IX PsaJ | J | 40 | Coelastrella | MKNFTTYLSTAPVVALAWFTVTAALLIEINRFFPDPLVFS |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-02-20 Deposition Author(s): Fadeeva, M. , Klaiman, D. , Nelson, N.