8BSF
Crystal structure of sars-cov-2 receptor binding domain (rbd-beta variant) in complex with 3d2 fab
PDB DOI: 10.2210/pdb8bsf/pdb
Classification: VIRAL PROTEIN Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2022-11-25 Deposition Author(s): Focht, D. , Kimbung, Y.R. , Pisitkun, T. , Welin, M.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.2 Å
Crystal structure of sars-cov-2 receptor binding domain (rbd-beta variant) in complex with 3d2 fab
Focht, D. , Kimbung, Y.R. , Pisitkun, T. , Welin, M.
Primary Citation of Related Structures: 8BSF
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Spike protein S1 | A | 231 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVKGFNCYFPLQSYGFQPTYGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFSGHHHHHH |
| 3D2 FAB HEAVY CHAIN | H | 231 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | EVQLVQSGAEVKKPGDSLKISCKGSGYSFANYWIGWVRQKPGKGLEWMGIIYPGDSDTRYSPSSLGQVSISVDKSISTAYLQWSSLKASDTAMYYCARHPIHGYGSGSLYNPDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT |
| 3D2 FAB LIGHT CHAIN | L | 216 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | QSVLTQPPSVSAAPGQKVTISCSGSNSNIGINYVSWYQQLPETAPKLLIYENNQRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDTSLGAYVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2022-11-25 Deposition Author(s): Focht, D. , Kimbung, Y.R. , Pisitkun, T. , Welin, M.