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FASTA Sequence PDB Format mmCIF Format
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8AA0

Levan utilisation machinery (utilisome) with levan fructo-oligosaccharides dp 8-12

PDB DOI: 10.2210/pdb8aa0/pdb

Classification: TRANSPORT PROTEIN
Organism(s): Bacteroides Thetaiotaomicron Vpi-5482

Deposited: 2022-06-29
Deposition Author(s): Ranson, N.A. , Silale, A. , Van Den Berg, B. , White, J.B.R.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

8aa0
Literature

Levan utilisation machinery (utilisome) with levan fructo-oligosaccharides dp 8-12

Ranson, N.A. , Silale, A. , Van Den Berg, B. , White, J.B.R.

Primary Citation of Related Structures: 8AA0


Proteins
Molecule Chains Sequence Length Organism Sequence
Glycoside hydrolase family 32 E 523 Bacteroides Thetaiotaomicron Vpi-5482 MMKNMILPIAFTALIASMTACSDETDPILTQKNWDGTATYFQSSDEHGFSMYYKPQVGFVGDPMPFYDPVAKDFKVMYLQDYRPNPEATYHPIFGVATKDGATYESLGELISCGGRDEQDAAIGTGGTIYNPADKLYYTFYTGNKFKPSSDQNAQVVMVATSPDFKTWTKNRTFYLKGDTYGYDKNDFRDPFLFQTEDGVYHMLIATRKNGKGHIAEFTSADLKEWESAGTFMTMMWDRFYECPDVFKMGDWWYLIYSEQASFMRKVQYFKGRTLEDLKATTANDAGIWPDNREGMLDSRAFYAGKTASDGTNRYIWGWCPTRAGNDNGNVGDVEPEWAGNLVAQRLIQHEDGTLTLGVPDAIDRKYTSAQEVKVMAKDGNMIESGKTYTLGEGASVIFNRLKVHNKISFTVKTASNTDRFGISFVRGTDSASWYSIHVNADEGKANFEKDGDDAKYLFDNKFNIPADNEYRVTIYSDQSVCVTYINDQLSFTNRIYQMQKNPWSLCCYKGEITVSDVQVSTY
Glycoside hydrolase family 32 M 523 Bacteroides Thetaiotaomicron Vpi-5482 MMKNMILPIAFTALIASMTACSDETDPILTQKNWDGTATYFQSSDEHGFSMYYKPQVGFVGDPMPFYDPVAKDFKVMYLQDYRPNPEATYHPIFGVATKDGATYESLGELISCGGRDEQDAAIGTGGTIYNPADKLYYTFYTGNKFKPSSDQNAQVVMVATSPDFKTWTKNRTFYLKGDTYGYDKNDFRDPFLFQTEDGVYHMLIATRKNGKGHIAEFTSADLKEWESAGTFMTMMWDRFYECPDVFKMGDWWYLIYSEQASFMRKVQYFKGRTLEDLKATTANDAGIWPDNREGMLDSRAFYAGKTASDGTNRYIWGWCPTRAGNDNGNVGDVEPEWAGNLVAQRLIQHEDGTLTLGVPDAIDRKYTSAQEVKVMAKDGNMIESGKTYTLGEGASVIFNRLKVHNKISFTVKTASNTDRFGISFVRGTDSASWYSIHVNADEGKANFEKDGDDAKYLFDNKFNIPADNEYRVTIYSDQSVCVTYINDQLSFTNRIYQMQKNPWSLCCYKGEITVSDVQVSTY
DUF4960 domain-containing protein T 461 Bacteroides Thetaiotaomicron Vpi-5482 MKSIIKQLYTILLVTVACLTVTGCSDDFKSGLRLDGDVWVNSIRLDEYAGTVDYQNKAIVVGVPYDYDITRMVVTEMNLSEGAKASIAIGETIDFSLPVSLTVKNGDVQMSYTITVKRDEAKILTFKLNDTYVGKVDQLSKTISVVVPLTVDITQLKGTFTVTDGATVTPASGSIQDFTNPVTYTATYRSAVTPYVVTVTQGNVIPTAFVGTASSVSLLTSPEEKAAAQWMMDNVSMSEYISFKDVVDGKVDLGKYTAIWWHFHADNGDNPPLPDDAKAAAEKFKVYYQNGGNLLLTRYATFYIANLGIAKDERVPNNSWGGNEDSPEITSAPWSFLITGSESHPLFQDLRWKDGDKSTVYTCDAGYAITNSTAQWHIGTDWGGYDDLNAWRNLTGGIDLAHGGDGAVVIAEFEPRSNSGRTLCIGSGCYDWYGKGVDASADYYHYNVEQMTLNAINYLCK
DUF4960 domain-containing protein G 461 Bacteroides Thetaiotaomicron Vpi-5482 MKSIIKQLYTILLVTVACLTVTGCSDDFKSGLRLDGDVWVNSIRLDEYAGTVDYQNKAIVVGVPYDYDITRMVVTEMNLSEGAKASIAIGETIDFSLPVSLTVKNGDVQMSYTITVKRDEAKILTFKLNDTYVGKVDQLSKTISVVVPLTVDITQLKGTFTVTDGATVTPASGSIQDFTNPVTYTATYRSAVTPYVVTVTQGNVIPTAFVGTASSVSLLTSPEEKAAAQWMMDNVSMSEYISFKDVVDGKVDLGKYTAIWWHFHADNGDNPPLPDDAKAAAEKFKVYYQNGGNLLLTRYATFYIANLGIAKDERVPNNSWGGNEDSPEITSAPWSFLITGSESHPLFQDLRWKDGDKSTVYTCDAGYAITNSTAQWHIGTDWGGYDDLNAWRNLTGGIDLAHGGDGAVVIAEFEPRSNSGRTLCIGSGCYDWYGKGVDASADYYHYNVEQMTLNAINYLCK
SusD homolog B 580 Bacteroides Thetaiotaomicron Vpi-5482 MKKIIYIATIGITLLTTSCDDFLDRQVPQGIVTGDQIASPEYVDNLVISAYAIWATGDDINSSFSLWNYDVRSDDCYKGGSGTEDGGVFNALEISKGINTTDWNINDIWKRLYQCITRANTALQSLDQMDEKTYPLKNQRIAEMRFLRGHAHFMLKQLFKKIVIVNDENMEPDAYNELSNTTYTNDEQWQKIADDFQFAYDNLPEVQIEKGRPAQAAAAAYLAKTYLYKAYRQDGADNALTGINEEDLKQVVKYTDPLIMAKGGYGLETDYSMNFLPQYENGAESVWAIQYSINDGTYNGNLNWGMGLTTPQILGCCDFHKPSQNLVNAFKTDSQGKPLFSTYDNENYEVATDNVDPRLFHTVGMPGFPYKYNEGYIIQKNDDWSRSKGLYGYYVSLKENVDPDCDCLKKGSYWASSLNHIVIRYADVLLMRAEALIQLNDGRITDAISLINEVRSRAAGSTMLIFNYKEDYGVNFKVTPYDLKAYAQDEAMKMLKWERRVEFGMESSRFFDLVRWGEAKDVINAYYVTEASRCSIYKNAGFTENKNEYLPVPFEQISASNGNYTQNFGWAAAAHHHHHH
SusD homolog J 580 Bacteroides Thetaiotaomicron Vpi-5482 MKKIIYIATIGITLLTTSCDDFLDRQVPQGIVTGDQIASPEYVDNLVISAYAIWATGDDINSSFSLWNYDVRSDDCYKGGSGTEDGGVFNALEISKGINTTDWNINDIWKRLYQCITRANTALQSLDQMDEKTYPLKNQRIAEMRFLRGHAHFMLKQLFKKIVIVNDENMEPDAYNELSNTTYTNDEQWQKIADDFQFAYDNLPEVQIEKGRPAQAAAAAYLAKTYLYKAYRQDGADNALTGINEEDLKQVVKYTDPLIMAKGGYGLETDYSMNFLPQYENGAESVWAIQYSINDGTYNGNLNWGMGLTTPQILGCCDFHKPSQNLVNAFKTDSQGKPLFSTYDNENYEVATDNVDPRLFHTVGMPGFPYKYNEGYIIQKNDDWSRSKGLYGYYVSLKENVDPDCDCLKKGSYWASSLNHIVIRYADVLLMRAEALIQLNDGRITDAISLINEVRSRAAGSTMLIFNYKEDYGVNFKVTPYDLKAYAQDEAMKMLKWERRVEFGMESSRFFDLVRWGEAKDVINAYYVTEASRCSIYKNAGFTENKNEYLPVPFEQISASNGNYTQNFGWAAAAHHHHHH
SusC homolog A 1041 Bacteroides Thetaiotaomicron Vpi-5482 MPGIMKNKKLLCSVCFLFAFMSALWGQNITVKGNVTSKTDGQPIIGASVVETTATTNGTITDFDGNFTLSVPVNSTLKITYIGYKPVTVKAAAIVNVLLEEDTQMVDEVVVTGYTTQRKADLTGAVSVVKVDEIQKQGENNPVKALQGRVPGMNITADGNPSGSATVRIRGIGTLNNNDPLYIIDGVPTKAGMHELNGNDIESIQVLKDAASASIYGSRAANGVIIITTKQGKKGQIKINFDASVSASMYQSKMNVLNTEQYGRAMWQAYVNDGENPNGNALGYAYNWGYNADGNPVLYGMTLSKYLDSKNTMPVADTDWFDEITRTGVIQQYNLSVSNGSEKGSSFFSLGYYKNLGVIKDTDFDRFSARMNSDYKLIDDILTIGQHFTLNRTSEVQAPGGIIETALDIPSAIPVYASDGSWGGPVGGWPDRRNPRAVLEYNKDNRYTYWRMFGDAYVNLTPFKGFNLRSTFGLDYANKQARYFTYPYQEGTQTNNGKSAVEAKQEHWTKWMWNAIATYQLEVGKHRGDVMIGMELNREDDSHFSGYKEDFSILTPDYMWPDAGSGTAQAYGAGEGYSLVSFFGKMNYSYADRYLLSLTLRRDGSSRFGKNHRYATFPSVSLGWRITQENFMKELTWLDDLKLRASWGQTGNQEISNLARYTIYAPNYGTTDSFGGQSYGTAYDITGSNGGGVLPSGFKRNQIGNDNIKWETTTQTNVGIDFSLFKQSLYGSLEYYYKKATDILTEMAGVGVLGEGGSRWINSGAMKNQGFEFNLGYRNKTAFGLTYDLNGNISTYRNEILELPETVAANGKFGGNGVKSVVGHTYGAQVGYIADGIFKSQDEVDNHATQEGAAVGRIRYRDIDHNGVIDERDQNWIYDPTPSFSYGLNIYLEYKNFDLTMFWQGVQGVDIISDVKKKSDFWSASNVGFLNKGTRLLNAWSPTNPNSDIPALTRSDTNNEQRVSTYFVENGSFLKLRNIQLGYTVPAVISKKMRMDRLRFYCSAQNLLTIKSKNFTGEDPENPNFSYPIPVNITFGLNIGF
SusC homolog I 1041 Bacteroides Thetaiotaomicron Vpi-5482 MPGIMKNKKLLCSVCFLFAFMSALWGQNITVKGNVTSKTDGQPIIGASVVETTATTNGTITDFDGNFTLSVPVNSTLKITYIGYKPVTVKAAAIVNVLLEEDTQMVDEVVVTGYTTQRKADLTGAVSVVKVDEIQKQGENNPVKALQGRVPGMNITADGNPSGSATVRIRGIGTLNNNDPLYIIDGVPTKAGMHELNGNDIESIQVLKDAASASIYGSRAANGVIIITTKQGKKGQIKINFDASVSASMYQSKMNVLNTEQYGRAMWQAYVNDGENPNGNALGYAYNWGYNADGNPVLYGMTLSKYLDSKNTMPVADTDWFDEITRTGVIQQYNLSVSNGSEKGSSFFSLGYYKNLGVIKDTDFDRFSARMNSDYKLIDDILTIGQHFTLNRTSEVQAPGGIIETALDIPSAIPVYASDGSWGGPVGGWPDRRNPRAVLEYNKDNRYTYWRMFGDAYVNLTPFKGFNLRSTFGLDYANKQARYFTYPYQEGTQTNNGKSAVEAKQEHWTKWMWNAIATYQLEVGKHRGDVMIGMELNREDDSHFSGYKEDFSILTPDYMWPDAGSGTAQAYGAGEGYSLVSFFGKMNYSYADRYLLSLTLRRDGSSRFGKNHRYATFPSVSLGWRITQENFMKELTWLDDLKLRASWGQTGNQEISNLARYTIYAPNYGTTDSFGGQSYGTAYDITGSNGGGVLPSGFKRNQIGNDNIKWETTTQTNVGIDFSLFKQSLYGSLEYYYKKATDILTEMAGVGVLGEGGSRWINSGAMKNQGFEFNLGYRNKTAFGLTYDLNGNISTYRNEILELPETVAANGKFGGNGVKSVVGHTYGAQVGYIADGIFKSQDEVDNHATQEGAAVGRIRYRDIDHNGVIDERDQNWIYDPTPSFSYGLNIYLEYKNFDLTMFWQGVQGVDIISDVKKKSDFWSASNVGFLNKGTRLLNAWSPTNPNSDIPALTRSDTNNEQRVSTYFVENGSFLKLRNIQLGYTVPAVISKKMRMDRLRFYCSAQNLLTIKSKNFTGEDPENPNFSYPIPVNITFGLNIGF
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-06-29
Deposition Author(s): Ranson, N.A. , Silale, A. , Van Den Berg, B. , White, J.B.R.