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FASTA Sequence PDB Format mmCIF Format
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7ZFC

Sars-cov-2 beta rbd in complex with nanobody c1, omi-18 and omi-31 fabs

PDB DOI: 10.2210/pdb7zfc/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2022-04-01
Deposition Author(s): Huo, J. , Ren, J. , Stuart, D.I. , Zhou, D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.24 Å

7zfc
Literature

Sars-cov-2 beta rbd in complex with nanobody c1, omi-18 and omi-31 fabs

Huo, J. , Ren, J. , Stuart, D.I. , Zhou, D.

Primary Citation of Related Structures: 7ZFC


Proteins
Molecule Chains Sequence Length Organism Sequence
Omi-31 heavy chain H 233 Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 EVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYGISWVRQAPGLGLEWMGGVIPILSAKHYAQRFQGRVTITADKSTGTAYMELSSLRSEDTAVYYCARDILHHDDLWGRFYYDGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
Omi-31 light chain L 216 Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 QSVVTQPPSASGTPGQRVTISCSGSSSDIGSNTVNWYQQLPGTAPKLLIYTNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADYFCAAWDESLNGRVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Nanobody C1 M 131 Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLVESGGGLVQPGGSLRLSCAASGFTNDFYSIAWFRQAPGKEREGVSWLSVSDNTPTYVDSVKDRFTISRHNANNTVYLQMNMLKPEDTAIYYCAAGRFAGRDTWPSSYDYWGQGTQVTVSSKHHHHHH
Omi-18 heavy chain A 222 Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLVESGGGLIQPGGSLRLSCAASGITVSSNYMTWVRQAPGKGLEWVSLLYAGGSAFYADSVKGRFTISRDNSKNTLYLLMNSLRVGDTAVYYCARDLQVYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
Omi-18 light chain B 213 Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 SYELTQPPSVSVAPGQTARITCGGNNDGAKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTITRIEAGDEADYYCQVWDSSRDHVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Spike protein S1 E 202 Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 HHHHHHTNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVKGFNCYFPLQSYGFQPTYGVGYQPYRVVVLSFELLHAPATVCGKK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-04-01
Deposition Author(s): Huo, J. , Ren, J. , Stuart, D.I. , Zhou, D.