7ZF4
Sars-cov-2 omicron rbd in complex with omi-9 fab and nanobody f2
PDB DOI: 10.2210/pdb7zf4/pdb
Classification: VIRAL PROTEIN Organism(s): Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2022-04-01 Deposition Author(s): Huo, J. , Ren, J. , Stuart, D.I. , Zhou, D.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 4.18 Å
Sars-cov-2 omicron rbd in complex with omi-9 fab and nanobody f2
Huo, J. , Ren, J. , Stuart, D.I. , Zhou, D.
Primary Citation of Related Structures: 7ZF4
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Nanobody F2 | F | 132 | Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 | QVQLVESGGGLVQAGGSLRLACIASGRTFHSYVMAWFRQAPGKEREFVAAISWSSTPTYYGESVKGRFTISRDNAKNTVYLQMNRLKPEDTAVYFCAADRGESYYYTRPTEYEFWGQGTQVTVSSKHHHHHH |
| Omi-9 heavy chain | H | 227 | Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 | QVQLVESGGGVVQPGRSLRLSCAASGFTFRTYAVHWVRQAPGKGPEWVAVISYDGSNKYYADSVKGRFTLSRDTSKNTLYLQMNSLRAEDTAVYYCASRGDTVTTGDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK |
| Omi-9 light chain | L | 217 | Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 | SYELTQPPSVSVSPGQTARITCSGDALPKQYTYWYQQKPGQPPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSTDSSATYPGNVVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS |
| Spike protein S1 | E | 202 | Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 | HHHHHHTNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGKK |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2022-04-01 Deposition Author(s): Huo, J. , Ren, J. , Stuart, D.I. , Zhou, D.