7ZA1
Gpc3-unc5d octamer structure and role in cell migration
PDB DOI: 10.2210/pdb7za1/pdb
Classification: SIGNALING PROTEIN Organism(s): Homo Sapiens , Rattus Norvegicus
Deposited: 2022-03-21 Deposition Author(s): Agirre, J. , Akkermans, O. , Aksu, M. , Ben Amar, D. , Berbeira-Santana, M. , Carrasquero, M. , Castellani, V. , Chavent, M. , Comoletti, D. , Del Toro, D. , Delloye-Bourgeois, C. , Huo, J. , Kokolaki, M. , Lowe, E. , Mccubbin, P. , Owens, R. , Pakos, I. , Peregrina, C. , Reynaud, F. , Ritu, R. , Robinson, C. , Seiradake, E. , White, E. , Zaballa, S.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 4.1 Å
Gpc3-unc5d octamer structure and role in cell migration
Agirre, J. , Akkermans, O. , Aksu, M. , Ben Amar, D. , Berbeira-Santana, M. , Carrasquero, M. , Castellani, V. , Chavent, M. , Comoletti, D. , Del Toro, D. , Delloye-Bourgeois, C. , Huo, J. , Kokolaki, M. , Lowe, E. , Mccubbin, P. , Owens, R. , Pakos, I. , Peregrina, C. , Reynaud, F. , Ritu, R. , Robinson, C. , Seiradake, E. , White, E. , Zaballa, S.
Primary Citation of Related Structures: 7ZA1
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Netrin receptor UNC5D | E | 268 | Homo Sapiens , Rattus Norvegicus | SAPGTLPHFIEEPEDAYIIKSNPIALRCKARPAMQIFFKCNGEWVHQNEHVSEESLDESSGLKVREVFINVTRQQVEDFHGPEDYWCQCVAWSHLGTSKSRKASVRIAYLRKNFEQDPQGREVPIEGMIVLHCRPPEGVPAAEVEWLKNEEPIDSEQDENIDTRADHNLIIRQARLSDSGNYTCMAANIVAKRRSLSATVVVYVNGGWSSWTEWSACNVRCGRGWQKRSRTCTNPAPLNGGAFCEGMSVQKITCTALCPVDGHHHHHH |
| Netrin receptor UNC5D | F | 268 | Homo Sapiens , Rattus Norvegicus | SAPGTLPHFIEEPEDAYIIKSNPIALRCKARPAMQIFFKCNGEWVHQNEHVSEESLDESSGLKVREVFINVTRQQVEDFHGPEDYWCQCVAWSHLGTSKSRKASVRIAYLRKNFEQDPQGREVPIEGMIVLHCRPPEGVPAAEVEWLKNEEPIDSEQDENIDTRADHNLIIRQARLSDSGNYTCMAANIVAKRRSLSATVVVYVNGGWSSWTEWSACNVRCGRGWQKRSRTCTNPAPLNGGAFCEGMSVQKITCTALCPVDGHHHHHH |
| Netrin receptor UNC5D | G | 268 | Homo Sapiens , Rattus Norvegicus | SAPGTLPHFIEEPEDAYIIKSNPIALRCKARPAMQIFFKCNGEWVHQNEHVSEESLDESSGLKVREVFINVTRQQVEDFHGPEDYWCQCVAWSHLGTSKSRKASVRIAYLRKNFEQDPQGREVPIEGMIVLHCRPPEGVPAAEVEWLKNEEPIDSEQDENIDTRADHNLIIRQARLSDSGNYTCMAANIVAKRRSLSATVVVYVNGGWSSWTEWSACNVRCGRGWQKRSRTCTNPAPLNGGAFCEGMSVQKITCTALCPVDGHHHHHH |
| Netrin receptor UNC5D | H | 268 | Homo Sapiens , Rattus Norvegicus | SAPGTLPHFIEEPEDAYIIKSNPIALRCKARPAMQIFFKCNGEWVHQNEHVSEESLDESSGLKVREVFINVTRQQVEDFHGPEDYWCQCVAWSHLGTSKSRKASVRIAYLRKNFEQDPQGREVPIEGMIVLHCRPPEGVPAAEVEWLKNEEPIDSEQDENIDTRADHNLIIRQARLSDSGNYTCMAANIVAKRRSLSATVVVYVNGGWSSWTEWSACNVRCGRGWQKRSRTCTNPAPLNGGAFCEGMSVQKITCTALCPVDGHHHHHH |
| Glypican-3 | A | 464 | Homo Sapiens , Rattus Norvegicus | ETGDATCHQVRSFFQRLQPGLKWVPETPVPGSDLQVCLPKGPTCCSRKMEEKYQLTARLNMEQLLQSASMELKFLIIQNAAVFQEAFEIVVRHAKNYTNAMFKNNYPSLTPQAFEFVGEFFTDVSLYILGSDINVDDMVNELFDSLFPVIYTQLMNPGLPDSALDINECLRGARRDLKVFGNFPKLIMTQVSKSLQVTRIFLQALNLGIEVINTTDHLKFSKDCGRMLTRMWYCSYCQGLMMVKPCGGYCNVVMQGCMAGVVEIDKYWREYILSLEELVNGMYRIYDMENVLLGLFSTIHDSIQYVQKNAGKLTTTIGKLCAHSQQRQYRFAYYPEDLFIDKKVLKVAHVEHEETLSSRRRELIQKLKSFISFYSALPGYICSHSPVAENDTLCWNGQELVERYSQKAARNGMKNQFNLHELKMKGPEPVVSQIIDKLKHINQLLRTMSMPKGRVGTKHHHHHH |
| Glypican-3 | C | 464 | Homo Sapiens , Rattus Norvegicus | ETGDATCHQVRSFFQRLQPGLKWVPETPVPGSDLQVCLPKGPTCCSRKMEEKYQLTARLNMEQLLQSASMELKFLIIQNAAVFQEAFEIVVRHAKNYTNAMFKNNYPSLTPQAFEFVGEFFTDVSLYILGSDINVDDMVNELFDSLFPVIYTQLMNPGLPDSALDINECLRGARRDLKVFGNFPKLIMTQVSKSLQVTRIFLQALNLGIEVINTTDHLKFSKDCGRMLTRMWYCSYCQGLMMVKPCGGYCNVVMQGCMAGVVEIDKYWREYILSLEELVNGMYRIYDMENVLLGLFSTIHDSIQYVQKNAGKLTTTIGKLCAHSQQRQYRFAYYPEDLFIDKKVLKVAHVEHEETLSSRRRELIQKLKSFISFYSALPGYICSHSPVAENDTLCWNGQELVERYSQKAARNGMKNQFNLHELKMKGPEPVVSQIIDKLKHINQLLRTMSMPKGRVGTKHHHHHH |
| Glypican-3 | D | 464 | Homo Sapiens , Rattus Norvegicus | ETGDATCHQVRSFFQRLQPGLKWVPETPVPGSDLQVCLPKGPTCCSRKMEEKYQLTARLNMEQLLQSASMELKFLIIQNAAVFQEAFEIVVRHAKNYTNAMFKNNYPSLTPQAFEFVGEFFTDVSLYILGSDINVDDMVNELFDSLFPVIYTQLMNPGLPDSALDINECLRGARRDLKVFGNFPKLIMTQVSKSLQVTRIFLQALNLGIEVINTTDHLKFSKDCGRMLTRMWYCSYCQGLMMVKPCGGYCNVVMQGCMAGVVEIDKYWREYILSLEELVNGMYRIYDMENVLLGLFSTIHDSIQYVQKNAGKLTTTIGKLCAHSQQRQYRFAYYPEDLFIDKKVLKVAHVEHEETLSSRRRELIQKLKSFISFYSALPGYICSHSPVAENDTLCWNGQELVERYSQKAARNGMKNQFNLHELKMKGPEPVVSQIIDKLKHINQLLRTMSMPKGRVGTKHHHHHH |
| Glypican-3 | B | 464 | Homo Sapiens , Rattus Norvegicus | ETGDATCHQVRSFFQRLQPGLKWVPETPVPGSDLQVCLPKGPTCCSRKMEEKYQLTARLNMEQLLQSASMELKFLIIQNAAVFQEAFEIVVRHAKNYTNAMFKNNYPSLTPQAFEFVGEFFTDVSLYILGSDINVDDMVNELFDSLFPVIYTQLMNPGLPDSALDINECLRGARRDLKVFGNFPKLIMTQVSKSLQVTRIFLQALNLGIEVINTTDHLKFSKDCGRMLTRMWYCSYCQGLMMVKPCGGYCNVVMQGCMAGVVEIDKYWREYILSLEELVNGMYRIYDMENVLLGLFSTIHDSIQYVQKNAGKLTTTIGKLCAHSQQRQYRFAYYPEDLFIDKKVLKVAHVEHEETLSSRRRELIQKLKSFISFYSALPGYICSHSPVAENDTLCWNGQELVERYSQKAARNGMKNQFNLHELKMKGPEPVVSQIIDKLKHINQLLRTMSMPKGRVGTKHHHHHH |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2022-03-21 Deposition Author(s): Agirre, J. , Akkermans, O. , Aksu, M. , Ben Amar, D. , Berbeira-Santana, M. , Carrasquero, M. , Castellani, V. , Chavent, M. , Comoletti, D. , Del Toro, D. , Delloye-Bourgeois, C. , Huo, J. , Kokolaki, M. , Lowe, E. , Mccubbin, P. , Owens, R. , Pakos, I. , Peregrina, C. , Reynaud, F. , Ritu, R. , Robinson, C. , Seiradake, E. , White, E. , Zaballa, S.