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7Z26

Crystal structure of ythdf2 yth domain in complex with m6a rna

PDB DOI: 10.2210/pdb7z26/pdb

Classification: RNA BINDING PROTEIN
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2022-02-25
Deposition Author(s): Caflisch, A. , Li, Y. , Nachawati, R. , Nai, F.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.9 Å

7z26
Literature

Crystal structure of ythdf2 yth domain in complex with m6a rna

Caflisch, A. , Li, Y. , Nachawati, R. , Nai, F.

Primary Citation of Related Structures: 7Z26


Proteins
Molecule Chains Sequence Length Organism Sequence
YTH domain-containing family protein 2 A 167 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGSSYHHHHHHSSGENLYFQHMKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTS
YTH domain-containing family protein 2 B 167 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGSSYHHHHHHSSGENLYFQHMKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*(6MZ)P*CP*U)-3') d 5 NA GGACU
RNA (5'-R(P*(6MZ)P*CP*U)-3') e 5 NA GGACU
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2022-02-25
Deposition Author(s): Caflisch, A. , Li, Y. , Nachawati, R. , Nai, F.