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FASTA Sequence PDB Format mmCIF Format
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7YRF

Cryo-em structure of compact ca16 empty particle in complex with a neutralizing antibody 8c4

PDB DOI: 10.2210/pdb7yrf/pdb

Classification: STRUCTURAL PROTEIN
Organism(s): Coxsackievirus A16

Deposited: 2022-08-09
Deposition Author(s): Cong, Y. , Liu, C.X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.91 Å

7yrf
Literature

Cryo-em structure of compact ca16 empty particle in complex with a neutralizing antibody 8c4

Cong, Y. , Liu, C.X.

Primary Citation of Related Structures: 7YRF


Proteins
Molecule Chains Sequence Length Organism Sequence
Genome polyprotein A 225 Coxsackievirus A16 HSTQETAIGNFFSRAGLVSIITMPTMGTQNTDGYANWDIDLMGYAQLRRKCELFTYMRFDAEFTFVVAKPNGELVPQLLQYMYVPPGAPKPTSRDSFAWQTATNPSVFVKMTDPPAQVSVPFMSPASAYQWFYDGYPTFGEHLQANDLDYGQCPNNMMGTFSIRTVGTKKSPHSITLRVYMRIKHVRAWIPRPLRNQPYLFKTNPNYKGNDIKCTSTSRDKITTL
Light chain of chain E 214 Coxsackievirus A16 DIQMTQSSSYLSVSLGGRVTITCKASDHINNWLAWYQQKPGNAPRLLISGATSLETGVPSRFSGSGSGKDYTLSITSLQTEDVATYYCQQYWNSPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Genome polyprotein B 310 Coxsackievirus A16 ENSNSASEGSTINYTTINYYKDAYAASAGRQDMSQDPKRFTDPVMDVIHEMAPPLKSPSAEACGYSDRVAQLTIGNSTITTQEAANIVIAYGEWPEYCPDTDATAVDKPTRPDVSVNRFFTLDTKSWAKDSKGWYWKFPDVLTEVGVFGQNAQFHYLYRSGFCVHVQCNASKFHQGALLVAVLPEYVLGTIAGGTGNENSHPPYATTQPGQVGAVLTHPYVLDAGIPLSQLTVCPHQWINLRTNNCATIIVPYMNTVPFDSALNHCNFGLLVIPVVPLDFNAGATSEIPITVTIAPMCAEFAGLRQAVKQ
The heavy chain of the antibody 8C4 F 214 Coxsackievirus A16 QVQLQQSGPELVKPGASVKISCKASGYAFSTSWMNWVIQRPGQGLEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARRDYGYFDYWGQGTTLTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKL
Capsid protein VP3 C 242 Coxsackievirus A16 GIPTELKPGTNQFLTTDDGVSAPILPGFHPTPPIHIPGEVRNLLEICRVETILEVNNLKTNETTPMQRLCFPVSVQSKTGELCAAFRADPGRDGPWQSTILGQLCRYYTQWSGSLEVTFMFAGSFMATGKMLIAYTPPGGSVPADRITAMLGTHVIWDFGLQSSVTLVVPWISNTHYRAHARAGYFDYYTTGIITIWYQTNYVVPIGAPTTAYIVALAAAQDNFTMKLCKDTEDIEQTANIQ
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-08-09
Deposition Author(s): Cong, Y. , Liu, C.X.