7YMI
Psii-pcb dimer of acaryochloris marina
PDB DOI: 10.2210/pdb7ymi/pdb
Classification: PHOTOSYNTHESIS Organism(s): Acaryochloris Marina Mbic11017
Deposited: 2022-07-28 Deposition Author(s): Gao, Y.Z. , Han, G.Y. , Shen, J.R. , Shen, L.L. , Wang, P.Y. , Wang, W.D. , Zhang, X.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.3 Å
Psii-pcb dimer of acaryochloris marina
Gao, Y.Z. , Han, G.Y. , Shen, J.R. , Shen, L.L. , Wang, P.Y. , Wang, W.D. , Zhang, X.
Primary Citation of Related Structures: 7YMI
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Photosystem II protein D1 2 | A | 360 | Acaryochloris Marina Mbic11017 | MTTVLQRRESASAWERFCSFITSTNNRLYIGWFGVLMIPTLLTAVTCFVIAFIGAPPVDIDGIREPVAGSLLYGNNIITGAVVPSSNAIGLHLYPIWEAASLDEWLYNGGPYQLIIFHYMIGCICYLGRQWEYSYRLGMRPWICVAYSAPLAATYSVFLIYPLGQGSFSDGMPLGISGTFNFMFVFQAEHNILMHPFHMFGVAGVLGGSLFAAMHGSLVSSTLVRETTEGESANYGYKFGQEEETYNIVAAHGYFGRLIFQYASFSNSRSLHFFLGAWPVVCIWLTAMGISTMAFNLNGFNFNHSIVDSQGNVVNTWADVLNRANLGFEVMHERNAHNFPLDLAAGESAPVALTAPVING |
| Photosystem II reaction center protein L | L | 38 | Acaryochloris Marina Mbic11017 | MATPNPNKQPVELNRASLFIGLLLVLVLALLFSSYFFN |
| Photosystem II reaction center protein M | M | 34 | Acaryochloris Marina Mbic11017 | MPVNDLGAIATALFVFIPCVFLILLYAQTASRGS |
| Photosystem II reaction center protein T | T | 46 | Acaryochloris Marina Mbic11017 | MDVIAYVFILACIIGLFFFAVFFREKPTLDKIQSRSFRESSQSTRR |
| Photosystem II reaction center X protein | X | 40 | Acaryochloris Marina Mbic11017 | MTITPSLQGFFYSILFGAIVLGLLGGGFIFFSQKDKIVRR |
| Photosystem II reaction center protein Ycf12 | Y | 39 | Acaryochloris Marina Mbic11017 | MDLLAAINLQVVLQLTMLGAVVIAGPIVVLLVALRSNAT |
| Photosystem II reaction center protein Z | Z | 62 | Acaryochloris Marina Mbic11017 | MSVLFQLLIAAFVALSFAMIIGVPVVFSTGDASDDANKLIWGGAAAWVVLLFVAALASIVVI |
| High light inducible protein | 2 | 352 | Acaryochloris Marina Mbic11017 | MQTYGNQNVEYGWWSGNSRFTDFSAQFLAAHIGQIASMTFFAGSITLFELSRYNPDIPLYAQGFVCLPQLSRVGFGVGAGGAVVDTYPFFAVGMIHLFAAAVFGSGAIFHILTGPKVLADSDSAASQRFHFEWDDFETQGRILGHHLLFLGSGALLFVVWAATHGIYDPNVGEVRAVSPGFDIVRIFKYGWATPGFNPFFVDNLEDVMGGHLFIALIDIAGGIYHILVKPWPYTERIFTKSGEALLGYALGGLGLMGLVAAYFCSVNDVVFPVEFFGPVLQPNLGFLPNFADTLDVSASGHTSRFWIANFHYFWGFYCIQGHLFHALRASGFDFRVLTKFFTTETVELGADI |
| High light inducible protein | 6 | 352 | Acaryochloris Marina Mbic11017 | MQTYGNQNVEYGWWSGNSRFTDFSAQFLAAHIGQIASMTFFAGSITLFELSRYNPDIPLYAQGFVCLPQLSRVGFGVGAGGAVVDTYPFFAVGMIHLFAAAVFGSGAIFHILTGPKVLADSDSAASQRFHFEWDDFETQGRILGHHLLFLGSGALLFVVWAATHGIYDPNVGEVRAVSPGFDIVRIFKYGWATPGFNPFFVDNLEDVMGGHLFIALIDIAGGIYHILVKPWPYTERIFTKSGEALLGYALGGLGLMGLVAAYFCSVNDVVFPVEFFGPVLQPNLGFLPNFADTLDVSASGHTSRFWIANFHYFWGFYCIQGHLFHALRASGFDFRVLTKFFTTETVELGADI |
| Unknown protein | G | 41 | Acaryochloris Marina Mbic11017 | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| High light inducible protein | 1 | 356 | Acaryochloris Marina Mbic11017 | MATKVDTAPEYPWYSGNSRLEDPAVQGKWLAAHIAQIALIVFWVGLNTFSENQAFDTSLPMFDQGLVLIPHLAALGFGVGSGGVVTNTFVFTQIGAIHMVSSFVLFGGAYFHAKIGPSVLADGGRGNTDQFAFSWDDPKKLGYILGHHLVLIGTGALLFVLWIKFHGIYDPTIGEVRTVAAPGSTIGDVVLKYGWFTPGYNCFFVDNLEDLASGHLFIGLVDIAGGIFHINVAPLPWSKVVNKYTYSPDGLLGTAIGGLALMGFISAYFCAVNTLVYPVEFFGPALEVKFGIAPYFKDTADLADGFYTSRAWLANITYYLAFYMLQGHLYHTLKAMGFKFEDIPAVIARDTGNAPA |
| High light inducible protein | 5 | 356 | Acaryochloris Marina Mbic11017 | MATKVDTAPEYPWYSGNSRLEDPAVQGKWLAAHIAQIALIVFWVGLNTFSENQAFDTSLPMFDQGLVLIPHLAALGFGVGSGGVVTNTFVFTQIGAIHMVSSFVLFGGAYFHAKIGPSVLADGGRGNTDQFAFSWDDPKKLGYILGHHLVLIGTGALLFVLWIKFHGIYDPTIGEVRTVAAPGSTIGDVVLKYGWFTPGYNCFFVDNLEDLASGHLFIGLVDIAGGIFHINVAPLPWSKVVNKYTYSPDGLLGTAIGGLALMGFISAYFCAVNTLVYPVEFFGPALEVKFGIAPYFKDTADLADGFYTSRAWLANITYYLAFYMLQGHLYHTLKAMGFKFEDIPAVIARDTGNAPA |
| High light inducible protein | 3 | 349 | Acaryochloris Marina Mbic11017 | MQTYGQTDVEYGWWSGNSRFSDYSGQFLAAHNGQIASMCFWAGSFTLFEVSRFNPDLPVYQQNLVCIPQLARAGWGVAAGGAVVDTYPYFAIAMIHLVAAAILGAGALYGVTKGPKVLADSEFSGAQRFHFEWDDFETQGRILGHHLLFLGAACLLFATWACTHGVYDPVAGEVRAISPSLNLVRFFKYGWATPGFNPYFVNNLEDVIGGHFFVSSLYIAGGIWHILVKPWPYTDKIFVKSGEALLAYALAGLAFAGFNAAYFCSVNDVVFPVELFGPVLEAKLNVTPYFAETLDASDGGHTTRFWISNFHYYWAFYCLQGHLFHALRSYGFDFRRIPRALASLTPQAN |
| High light inducible protein | 7 | 349 | Acaryochloris Marina Mbic11017 | MQTYGQTDVEYGWWSGNSRFSDYSGQFLAAHNGQIASMCFWAGSFTLFEVSRFNPDLPVYQQNLVCIPQLARAGWGVAAGGAVVDTYPYFAIAMIHLVAAAILGAGALYGVTKGPKVLADSEFSGAQRFHFEWDDFETQGRILGHHLLFLGAACLLFATWACTHGVYDPVAGEVRAISPSLNLVRFFKYGWATPGFNPYFVNNLEDVIGGHFFVSSLYIAGGIWHILVKPWPYTDKIFVKSGEALLAYALAGLAFAGFNAAYFCSVNDVVFPVELFGPVLEAKLNVTPYFAETLDASDGGHTTRFWISNFHYYWAFYCLQGHLFHALRSYGFDFRRIPRALASLTPQAN |
| Photosystem II CP47 reaction center protein | B | 506 | Acaryochloris Marina Mbic11017 | MGLPWYRVHTVVLNDPGRLLSVHLMHTALVSGWAGSMALYELAKYDPSDPVLNPMWRQGTFVMPVMTRIGVTHSWSGWTVTGEPWVTQPGILGAHLNFFSYEGVILMHILAAGLFFLAAVWHWINWDLDIYYPDGSSEPASDWPKIFGLHLLTLGIVCFGFGSLHLTGILGPGMWVSDPYGLTGHVQGVSPDWRPFAFDPYNPTGLVTHHISAGIALIIGGIFHTVSRPSERLYNALSMGNVETVLSSSVAFVAAAAFVMVGTMWYGSATTPIELFGPTRYQWDSGYFQTEIQRRVQSGQTWDQIPEKLVFYDYIGNSPAKGGLFRTGAMNSGDGIARAWEGHPTFTDSEGRELFVRRMPNFFETFPVVLTDKDGVVRADIPFRRAESRYSFEQKGVSVSFEGGTLNGQTFTDAPSVKKYARKAQLGEPFEFDRETLGSDGVFRTSTRGWFAFSHSCYALLFFFGHWWHGARTIFKDVFEGVDPNLPEEQVEWGVFQKVGDTTTRA |
| High light inducible protein | 4 | 353 | Acaryochloris Marina Mbic11017 | MTASVRGRRGGKVAVQTDLPTSVLSNFENEWWAGNVRMTDLSGMLLGAHLCHAALMSVVPGAFIVQEVARYQPGVSLPDQGMIFMPHLAALGVGVGAGGEIVDTYPFFVIGVLHFFIAAVCCAAGLFHTFRGETDLNDAPDDSYAAAFRYEWDDFESLSTIVGHHLVFISVACLIFAVNATYGTGMYDINTDTVHQISPNLNPITLIGYLFGFTPDGWSGAGMAAVNNMEDVIGGHFLIGVIDLLGAAFHILYRKPTPLFTKHPVFSPANGGWSNVGMLNSELILSWSVASVGFMGISSSLFIRYCDVAYPPVFHGVDRTGAATLQLILGLVWMLGGGLWHGLRGERLYAANK |
| High light inducible protein | 8 | 353 | Acaryochloris Marina Mbic11017 | MTASVRGRRGGKVAVQTDLPTSVLSNFENEWWAGNVRMTDLSGMLLGAHLCHAALMSVVPGAFIVQEVARYQPGVSLPDQGMIFMPHLAALGVGVGAGGEIVDTYPFFVIGVLHFFIAAVCCAAGLFHTFRGETDLNDAPDDSYAAAFRYEWDDFESLSTIVGHHLVFISVACLIFAVNATYGTGMYDINTDTVHQISPNLNPITLIGYLFGFTPDGWSGAGMAAVNNMEDVIGGHFLIGVIDLLGAAFHILYRKPTPLFTKHPVFSPANGGWSNVGMLNSELILSWSVASVGFMGISSSLFIRYCDVAYPPVFHGVDRTGAATLQLILGLVWMLGGGLWHGLRGERLYAANK |
| Photosystem II CP43 reaction center protein | C | 490 | Acaryochloris Marina Mbic11017 | MKVCALGWHPKTKSMKTSSSLRRFYHVETPFNPSAAGYDRATTGYGWWAGNARLTDLSGQLTGAHIAHAGMITFWAGAMTLFEVSHFIPEKPMYEQGSILLAHLAAEGFGVGPGGEVISTYPYFVIGAIHLIASAVLGFGGLYHTFRGPAKFEDYSDWWGYDWEDKEKMMQILGIHLIFLGIGALAFAAKAMFFGGLYDPWAPGGGNVRLITNPTWNLGTFLGYITRSPWGEGGWIVSVNNLEDVVGGHLLVGVHYIFGGVFHILVKPWGWVRRAYVWSGEAYLSYSLGALYMCGMIAVGYVWFNNTVYPSEFYGPTAAEASQAQAMTFLIRDQRLGANIASAQGPTGLGKYLMRSPSGEIIFGGETMRFWDFRGPWLEPLRGPNGLDLNKLRNDIQPWQARRAAEYMTHAPLGALNSVGGVATEINSVNYVSPRSWLSTSHFCLAFFFFVGHIWHSGRARAAAAGFEKGIERKTEYALSLPDIDATSVD |
| Photosystem II D2 protein 1 | D | 351 | Acaryochloris Marina Mbic11017 | MTIAVGRAQERGWFDVLDDWLKRDRFVFIGWSGILLFPCAFLSIGGWFTGTTFVTSWYTHGLASSYLEGANFLTVAVSTPADSLGHSLLLLWGPEAQGDFTRWCQLGGLWNFTTLHGVFGLIGFMLRQFEIARLVGVRPYNAVAFSGPIAVYVSVFLMYPLGQSSWFFAPSWGVTSIFRFLLFAQGFHNLTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGQDANTFAAFTPTQAEETYSMVTANRFWSQIFGIAFSNKRWLHFFMLFVPVTGLWASAIGLVGIALNMRAYDFVSQEIRAAEDPEFETFYTKNILLNEGLRAWMAPQDQIHENFIFPEEVLPRGNAL |
| Cytochrome b559 subunit alpha | E | 83 | Acaryochloris Marina Mbic11017 | MSGRTGERPFGDIVTSIRYWIIHTITVPMLFLAGWLFVSTGLAYDVFGTPRPNEYFDQARQGLPLVTDRYEGKQQIDEFTKGL |
| Photosystem II protein Y | F | 99 | Acaryochloris Marina Mbic11017 | MTARTQLQRPPQRKYPIYTVRWLAVHTLGVPLVWFLGAIASMQFINRMDAYEAVAPTMIAGIDLRLALVLAPILFSVVWNVIFFGGPTLQELQEVLQRE |
| Photosystem II 10 kDa phosphoprotein PsbH | H | 71 | Acaryochloris Marina Mbic11017 | MPKQTWWGDVLKGNNNSEAGKFVPGWGTTPVMAGFVVMITLLLLIMLQVYNHTIVLDGVDAGWTSLGGFGQ |
| Photosystem II protein PsbI | I | 34 | Acaryochloris Marina Mbic11017 | MAILKFVTYAWIIFVISLFFFGFISSDTTRNPKA |
| Photosystem II reaction center protein K | K | 45 | Acaryochloris Marina Mbic11017 | MEAVLLLAKLPEAFSVFSPIVDVMPVIPLFFLALAFVWQAAVGFK |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-07-28 Deposition Author(s): Gao, Y.Z. , Han, G.Y. , Shen, J.R. , Shen, L.L. , Wang, P.Y. , Wang, W.D. , Zhang, X.