Crystal structure of sars-cov-2 spike receptor binding domain bound with p5s-2b10
PDB DOI: 10.2210/pdb7xsc/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2022-05-13 Deposition Author(s): Lin, Z. , Wang, X. , Wang, Z.
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
P5S-2B10 Heavy chain | A | 220 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | EVQLVESGGGLIQPGGSLRLSCVVSGFTVSSNYMSWIRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDSSQNTLYLQMNSLRAEDTAVYYCARHPYGDHAWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK |
P5S-2B10 Heavy chain | D | 220 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | EVQLVESGGGLIQPGGSLRLSCVVSGFTVSSNYMSWIRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDSSQNTLYLQMNSLRAEDTAVYYCARHPYGDHAWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK |
Spike protein S1 | E | 258 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAADPRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKHHHHHH |
Spike protein S1 | F | 258 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAADPRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKHHHHHH |
P5S-2B10 Light chain | B | 214 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | DIQMTQSPSPLSASVGDRVTITCQASQDIRNFLNWYQQKPGKAPKLLIHDASKLEAGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
P5S-2B10 Light chain | H | 214 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | DIQMTQSPSPLSASVGDRVTITCQASQDIRNFLNWYQQKPGKAPKLLIHDASKLEAGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Method: X-RAY DIFFRACTION