Crystal structure of sars-cov-2 spike receptor binding domain bound with p2s-2e9 fab
PDB DOI: 10.2210/pdb7xsa/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2022-05-13 Deposition Author(s): Wang, X. , Wang, Z.
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
P2S-2E9 Heavy chain | B | 218 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCARHRIGYIFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVE |
P2S-2E9 Heavy chain | H | 218 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCARHRIGYIFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVE |
P2S-2E9 Light chain | C | 215 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | QSALTQPASVSGSPGQSITISCTGTSSDVGDFNYVSWYQQHPGKAPKLMIYDVTKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYCCSSYTTSSISFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS |
P2S-2E9 Light chain | I | 215 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | QSALTQPASVSGSPGQSITISCTGTSSDVGDFNYVSWYQQHPGKAPKLMIYDVTKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYCCSSYTTSSISFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS |
Spike protein S1 | E | 242 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAADPTNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVKGFNCYFPLQSYGFQPTYGVGYQPYRVVVLSFELLHAPATVCGPHHHHHH |
Spike protein S1 | J | 242 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAADPTNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVKGFNCYFPLQSYGFQPTYGVGYQPYRVVVLSFELLHAPATVCGPHHHHHH |
Method: X-RAY DIFFRACTION