7VY1
Membrane arm of deactive state ci from q10 dataset
PDB DOI: 10.2210/pdb7vy1/pdb
Classification: ELECTRON TRANSPORT Organism(s): Sus Scrofa
Deposited: 2021-11-13 Deposition Author(s): Gu, J.K. , Yang, M.J.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.3 Å
Membrane arm of deactive state ci from q10 dataset
Primary Citation of Related Structures: 7VY1
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial | Q | 473 | Sus Scrofa | MVPVSLWRGKMAALRALCSLRGVAAQVLRPGAGARLPIQPSRGARQWQPDVEWAEQFGGAVMYPTKETAHWKPPPWNDVDPPKDTLVSNLTLNFGPQHPAAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIQPPPRAQWIRVLFGEITRLLNHIMAVTTHALDIGAMTPFFWMFEEREKMFEFYERVSGARMHAAYIRPGGVHQDLPLGLLDDIYEFSKNFSFRIDELEEMLTNNRIWRNRTVDIGVVTAEDALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPIGSRGDCYDRYLCRVEEMRQSLRIISQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEVDR |
| NADH dehydrogenase 1 beta subcomplex 6 | B | 128 | Sus Scrofa | MSGYTPDEKLRLQQLRELRRRWLKDQELSPREPVLPPRRVWPMEQFWNKFLQDGAPWKNVIYKTYRHSIFAVTHVLIPVWIIHYYLKYHVTAKPYTVVERKPRIFPGDTILETGEVIPLMKEFPDQHH |
| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial | C | 186 | Sus Scrofa | MAAAKAGVLGVRWLQRAARKVVPLGARTASHVTKDMFPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQQERDPWYDWDHPDLRLNWGEPIHWDLDMYIRNRVDTSPTPVSWNTMCKHLFGFVAFMLFMFWVGEIYPSYQPVGPKQYPYNDLYLERGGDPTKEPEPVVHYEI |
| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 | D | 176 | Sus Scrofa | MPDSWDKDVYPEPPRRTPAPAPQTSLPNPVTYLTKIFDLLVDRPVTLAREFIEQQHAKNRYYYYHREFRRVPDITECEEKDILCMFEAEMQWRRDYKVDQEIVNIIQERLKACQQREGESYRQNCAKELEQFTQVSKAFQDRYSDLGAHYSARKCLAKQKQRMLAERKAAKEAAAA |
| Complex I-ESSS | E | 154 | Sus Scrofa | MAAGVLGLCARRLLAAAATRGLPAARVRWESGSSRAVIAPSALVGKRPPEPTIRLQEDPDPEDENLYEKNPDSHGYDKDPIVDLWNMRVVFFFGFSIVLVLGSTFVAYLPDYRMQEWARREAERLVKYREANGLPLMESNCFDPNKIQLPEDED |
| Complex I-KFYI | F | 76 | Sus Scrofa | MAASALFRPFSKLLSSARLPSGSSARSKFYIREPPHGSPDWLKVGLTLGTSVFLWIYLIKQHKEDVLEYKRRNGLE |
| NADH dehydrogenase [ubiquinone] 1 subunit C2 | G | 122 | Sus Scrofa | MTMMSGRPGRVPLQFLPNEARSLPPPKLTDPRLVYMGFLGYCSGLIDNAIRRRPVVSAGLHRQLLYVTSFVFFGYYLLKRQDYMYALRDHDMFAYVKSHPEDFPEKDKKTYGEILEEFHPVR |
| NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 | H | 106 | Sus Scrofa | MPFFDVQKRLGLDLDRWMTIQSAEQPHKIPGRCHAFEKEWIECAHGIGGIRAEKECKIEFDDFVECLLRQKTMKRLSAIKRQRDKLIKEGKYTPPPHHLGKEDPRP |
| NADH-ubiquinone oxidoreductase chain 2 | I | 347 | Sus Scrofa | MNPIIYTTLIMTVMSGTMLVMISSHWLLIWIGFEMNLLAMIPVLMKNFNPRATEAATKYFLTQATASMMLMMAIIINLLYSGQWTITKMFNPVAMTMMTMALAMKLGLSPFHFWVPEVTQGISLQAGLLLLTWQKLAPLSVLCQISQSINPNLMLTMAMLSILIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLPYNTTMTILNLLIYITMTLAMFMLLIHSSATTTLSLSHTWNKMPVITSLMMVTLLSMGGLPPLSGFMPKWMIIQEMTKNESIIMPTLMAMTALLNLYFYMRLAYSSSLTMFPSTNNMKMKWQFEHTKQMKLLPTMIVLSTLVLPMTPALSSLN |
| ND3 | J | 113 | Sus Scrofa | MNIMLTLLTNVTLASLLVLIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLKTMLTMALFLLILLAASLAYEWTQKGLEW |
| NADH-ubiquinone oxidoreductase chain 4L | K | 98 | Sus Scrofa | MPLVYMNIIMAFAIALAGLLMYRSHLMSSLLCLEGMMLSLFIMSTLIILNTHFTLANMMPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQC |
| NADH-ubiquinone oxidoreductase chain 1 | S | 318 | Sus Scrofa | MFMINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADALKLFTKEPLRPATSSISMFIIAPILALSLALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSYTLSTLITTQEHIWMIFTSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYANIIMMNAFTAILFLGASHDPHTPELYTINFVLKTLALTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISLPIMTASIPPQS |
| NADH-ubiquinone oxidoreductase chain 5 | L | 603 | Sus Scrofa | MNPFASLTLTTLTILTIPIMMSNSNIYKTNLYPNYVKTTVSYAFTLSLVPLLMFMHTGQEMIISNWHWMTLQTVELSLSFKMDYFSVMFIPVALFVTWSIMEFSMWYMHSDPFINRFFKYLLLFLITMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRTDANTAALQAILYNRIGDIGFVLSMAWFLTHSNAWDLQQIFMLNNECPNMPLIGLLLAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFYPLMETNKLVQTMTLCLGAITTLFTALCAITQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICMHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLYKAMPFTTTALIIGSLALTGMPYLTGFYSKDLIIEAVNMSYTNAWALLMTLIATSLTAAYSTRIIFFAFLGKPRFPPLVLINENNPLLINSIKRLLIGSIFAGFIISNNIPPMTVPNTTMPLYMKMTALIVTIMGFMLALELNNTTYYLKFKYPSQTYKFSNMLGYYPSIMHRLPTYHNLSMSQKSASSLLDLIWLETILPKTTSFIQMKMSIMVSNQKGLIKLYFLSFLITIMISMTLFN |
| NADH-ubiquinone oxidoreductase chain 6 | M | 175 | Sus Scrofa | MTMYIAFILSTIFVIGFVGFSSKPSPIYGGLGLIVSGGVGCGIVLNFGGSFLGLMVFLIYLGGMLVVFGYTTAMATEMYPEVWVSNKTVFGAFVSGLMMEFCMVYYALKEEEVEIIFKFNGLGDWVIYDTGDSGFFSEEAMGIAALYSYGTWLVIVTGWSLLIGVVVIMEITRGN |
| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 | N | 58 | Sus Scrofa | MMNVLQIVRDHWVHILVPVGFVFGCYLDRRSDEKLTAFRNKSLLFKRELRPNEEVTWK |
| Complex I-B15 | O | 129 | Sus Scrofa | MSFPKYKPSRLATLPATLDPAEYDISPETRKAQAERLAIRSRLKREYLLQYNDPNRLGVIEDPALIRWTYARSANIYPNFRPTPKTSLLGALFGIGPLFFWYYVFKTDRDKKEKLIQEGKLDQTFNISY |
| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 | P | 179 | Sus Scrofa | MAFSAPAAYLTHQQKVLRLYKRALRHLESWCVHRDKYRYFACLMRARFDEHKNEKDMVKATQLLRQAEEEFWYGQHPQPYIFPESPGGTSYERYECYKVPEWCLDDWHPSEKAMYPDYFAKREQWKRLRRESWEREVKQLQEETPPGGPRTEALPPARKEGDLPPLWWHIVTRPRERPM |
| NADH-ubiquinone oxidoreductase chain 4 | R | 459 | Sus Scrofa | MLKIIIPTTMLLPMTWMSKHNMIWINATVHSLLISLISLSLLNQLGENSLNFSLTFFSDSLSAPLLVLTTWLLPLMLMASQSHLSKETTTRKKLYITMLILLQLFLIMTFTATELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALVYIQNTTGSLNFLIIHYWSHPLSNSWSNIFMWLACIMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTILNPLTNYMAYPFLMLSMWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAIMIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERVHSRTMILARGLQTLLPLMATWWLVASLTNLALPPSINLIGELFIITASFSWSNITIILMGMNMMITALYSLYMLITTQRGKYTHHINNIKPSFTRENALMALHILPLLLLTLNPKMILGPLY |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 | U | 84 | Sus Scrofa | MAGRIASFLKNAWAKEPVLVASFAIGGLAIILPSLSPYTNYAIRINRATPYNYPVPLRDDGNMPDVPSHPQDPQGPSLEWLKNL |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 | V | 141 | Sus Scrofa | MAKTLLHKYSDIPEGTECHRKAYASTSIGGATGLIVSAYSIALKPPASFLEGVARTGRYTFTSAAIGAIFGLTSCISAQVREKPDDPLNYFIGGCAGGLTLGARTRSYGIGAAACAYMGLTAALVKMGQLEGWQVFAEPKV |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 | W | 144 | Sus Scrofa | MAASKVKQDMPPPGGYGPIDYKRNLPRRGLSGYSMFAVGIGTLLFGYWSMMKWNRERRRLQIEDFEARIALMPLFQAEKDRRVLQMLRENLEEEAIIMKDVPDWKVGESVFHTTRWVTPMMGELYGLRTNEEILSATYGFIWYT |
| Acyl carrier protein | X | 156 | Sus Scrofa | MAARVLCACVRRLPAAFAPLPRIPTVVAARPLSTTLFPTGAQARSRALQPALVLAQAPGGVTQLCRRYSDAPPLTLEAIKDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIADKKDVYE |
| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial | Y | 105 | Sus Scrofa | MSPLQRLAPFTRVGGRFLRGRGAGVAGGGGVRHAGGGVHIEPRYRQFPQLTRSQLIQAEFFSATMWFWILWRFWHDSDAVLGHFPYPDPSQWTDEELGILPDDED |
| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 | Z | 98 | Sus Scrofa | MAHGHGHEHGHSKMELPDYKQWKIEGTPLETVQEKLAARGLRDPWGRNEAWRYSGGFANNVSFVGALLKGFKWGFAAFVVAVGAEYYLESQNKDKKHH |
| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial | A | 189 | Sus Scrofa | MAAMSLLQRASVTAVATLSRSRLGTRFGFGGFLTHGFPKTGAPVRHSGDHGKRLFIIKPSGFYDRRFLKLMRFYILLTGIPVAIGITLVNVFIGEAELADIPEGYVPEHWEYFKHPISRWIARTFYDGPEKNYEKTMAILQIEAEKAELRLKELEVRRLMRARGDGPWYQYPTIDKALIDHSPKTTPDN |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-11-13 Deposition Author(s): Gu, J.K. , Yang, M.J.