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FASTA Sequence PDB Format mmCIF Format
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7UNW

Pseudomonas aeruginosa 70s ribosome initiation complex bound to if2-gdpcp (structure ii-b)

PDB DOI: 10.2210/pdb7unw/pdb

Classification: RIBOSOME
Organism(s): Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct

Deposited: 2022-04-11
Deposition Author(s): Basu, R.S. , Gagnon, M.G. , Sherman, M.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.6 Å

7unw
Literature

Pseudomonas aeruginosa 70s ribosome initiation complex bound to if2-gdpcp (structure ii-b)

Basu, R.S. , Gagnon, M.G. , Sherman, M.B.

Primary Citation of Related Structures: 7UNW


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
23S Ribosomal RNA a 2891 NA GGUCAAGUGAAGAAGCGCAUACGGUGGAUGCCUUGGCAGUCAGAGGCGAUGAAAGACGUGGUAGCCUGCGAAAAGCUUCGGGGAGUCGGCAAACAGACUUUGAUCCGGAGAUCUCUGAAUGGGGGAACCCACCUAGGAUAACCUAGGUAUCUUGUACUGAAUCCAUAGGUGCAAGAGGCGAACCAGGGGAACUGAAACAUCUAAGUACCCUGAGGAAAAGAAAUCAACCGAGAUUCCCUUAGUAGUGGCGAGCGAACGGGGAUUAGCCCUUAAGCUUCAUUGAUUUUAGCGGAACGCUCUGGAAAGUGCGGCCAUAGUGGGUGAUAGCCCCGUACGCGAAAGGAUCUUUGAAGUGAAAUCGAGUAGGACGGAGCACGAGAAACUUUGUCUGAACAUGGGGGGACCAUCCUCCAAGGCUAAAUACUACUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAAAGAACCCCGGAGAGGGGAGUGAAAUAGAACCUGAAACCGUAUGCGUACAAGCAGUGGGAGCCUACUUGUUAGGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCAGUGGCAAGCUUAACCGUAUAGGGUAGGCGUAGCGAAAGCGAGUCUUAAUAGGGCGUUUAGUCGCUGGGUAUAGACCCGAAACCGGGCGAUCUAUCCAUGAGCAGGUUGAAGGUUAGGUAACACUGACUGGAGGACCGAACCCACUCCCGUUGAAAAGGUAGGGGAUGACUUGUGGAUCGGAGUGAAAGGCUAAUCAAGCUCGGAGAUAGCUGGUUCUCCUCGAAAGCUAUUUAGGUAGCGCCUCAUGUAUCACUCUGGGGGGUAGAGCACUGUUUCGGCUAGGGGGUCAUCCCGACUUACCAAACCGAUGCAAACUCCGAAUACCCAGAAGUGCCGAGCAUGGGAGACACACGGCGGGUGCUAACGUCCGUCGUGAAAAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUUGUGGUUAAGUGGUAAACGAUGUGGGAAGGCUUAGACAGCUAGGAGGUUGGCUUAGAAGCAGCCACCCUUUAAAGAAAGCGUAAUAGCUCACUAGUCGAGUCGGCCUGCGCGGAAGAUGUAACGGGGCUCAAACCACACACCGAAGCUGCGGGUGUCACGUAAGUGACGCGGUAGAGGAGCGUUCUGUAAGCCUGUGAAGGUGAGUUGAGAAGCUUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUGAGUAACGACAAUGGGUGUGAAAAACACCCACGCCGAAAGACCAAGGGUUCCUGCGCAACGUUAAUCGACGCAGGGUUAGUCGGUUCCUAAGGCGAGGCUGAAAAGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUCUGGUUACUGCGAUGGAGGGACGGAGAAGGCUAGGCCAGCUUGGCGUUGGUUGUCCAAGUUUAAGGUGGUAGGCUGAAAUCUUAGGUAAAUCCGGGGUUUCAAGGCCGAGAGCUGAUGACGAGUCGUCUUUUAGAUGACGAAGUGGUUGAUGCCAUGCUUCCAAGAAAAGCUUCUAAGCUUCAGGUAACCAGGAACCGUACCCCAAACCGACACAGGUGGUCGGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAAUGGCACCGUAACUUCGGGAGAAGGUGCGCCGGCUAGGGUGAAGGAUUUACUCCGUAAGCUCUGGCUGGUCGAAGAUACCAGGCCGCUGCGACUGUUUAUUAAAAACACAGCACUCUGCAAACACGAAAGUGGACGUAUAGGGUGUGACGCCUGCCCGGUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAACGAUGGCGGCGCUGUCUCCACCCGAGACUCAGUGAAAUUGAAAUCGCUGUGAAGAUGCAGUGUAUCCGCGGCUAGACGGAAAGACCCCGUGAACCUUUACUGUAGCUUUGCACUGGACUUUGAGCCUGCUUGUGUAGGAUAGGUGGGAGGCUUUGAAGCGUGGACGCCAGUUCGCGUGGAGCCAUCCUUGAAAUACCACCCUGGCAUGCUUGAGGUUCUAACUCUGGUCCGUAAUCCGGAUCGAGGACAGUGUAUGGUGGGCAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGUACGAAGGUGCGCUCAGACCGGUCGGAAAUCGGUCGCAGAGUAUAAAGGCAAAAGCGCGCUUGACUGCGAGACAGACACGUCGAGCAGGUACGAAAGUAGGUCUUAGUGAUCCGGUGGUUCUGUAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGCCGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGACGUUUGAGAUUUGAGAGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGAACCUCUGGUGUUCCGGUUGUCACGCCAGUGGCAUUGCCGGGUAGCUAUGUUCGGAAAAGAUAACCGCUGAAAGCAUCUAAGCGGGAAACUUGCCUCAAGAUGAGAUCUCACUGGGAACUUGAUUCCCCUGAAGGGCCGUCGAAGACUACGACGUUGAUAGGCUGGGUGUGUAAGCGUUGUGAGGCGUUGAGCUAACCAGUACUAAUUGCCCGUGAGGCUUGACCAU
5S Ribosomal RNA b 120 NA UGCUUGACGAUCAUAGAGCGUUGGAACCACCUGAUCCCUUCCCGAACUCAGAAGUGAAACGACGCAUCGCCGAUGGUAGUGUGGGGUCUCCCCAUGUGAGAGUAGGUCAUCGUCAAGCUC

Proteins
Molecule Chains Sequence Length Organism Sequence
50S ribosomal protein L11 J 143 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MAKKIQAYIKLQVKAGQANPSPPVGPALGQHGVNIMEFCKAFNAKTQGQEPGLPTPVIITVYSDRSFTFETKSTPAAVLLKKAAGITSGSARPNSQKVGTVTRAQLEEIAKTKQADLTAADLDAAVRTIAGSARSMGLNVEGV
30S ribosomal protein S11 K 129 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MAKPAARPRKKVKKTVVDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTPFAAQVAAERAGQAALEYGLKNLDVNVKGPGPGRESAVRALNACGYKIASITDVTPIPHNGCRPPKKRRV
50S ribosomal protein L13 L 142 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MKTYTAKPETVQRDWFVVDAAGQTLGRLATEIARRLRGKHKPEYTPHVDTGDYIVVINAEQVRVTGAKTTDKMYYHHSGFPGGIKSINFEKLIAKAPERVIETAVKGMLPKNPLGRDMYRKLKVYKGASHPHTAQQPQELKI
50S ribosomal protein L14 M 122 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MIQTQSMLDVADNSGARRVMCIKVLGGSHRRYAGIGDIIKVTVKEAIPRGKVKKGQVMTAVVVRTKHGVRRTDGSIIRFDGNAAVLLNNKQEPIGTRIFGPVTRELRTEKFMKIVSLAPEVL
50S ribosomal protein L15 N 144 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MQLNDLRSAPGARREKHRPGRGIGSGLGKTGGRGHKGLTSRSGGKVAPGFEGGQQPLHRRLPKFGFVSLKAMDRAEVRTSELAKVEGDVVSLQTLKDANLINQHVQRVKVMLSGEVGRAVTLKGIAATKGARAAIEAAGGKFED
50S ribosomal protein L16 O 137 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MLQPKRTKFRKQMTGHNRGLAHRGSKVSFGEYALKATSRGRLTARQIESARRALTRHVKRGGKIWIRVFPDKPVTKKPLEVRMGKGKGGVEYWVAQIQPGKVLYEIEGVSEELAREAFALAAAKLPLATSFVKRTVM
50S ribosomal protein L17 P 129 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MRHRKSGRHLSRTSAHRKAMFQNMAVSLFEHELIKTTLPKAKELRRVAEPLITLAKEDSVANRRLAFDRTRSKAAVGKLFNDLGKRYANRPGGYLRILKCGFRAGDNAPMAYVELVDRPVGGEVVEAAE
50S ribosomal protein L18 Q 116 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MSVKKETRLRRARKARLKMRELETVRLCVYRSSQHIYAQVIAADGGKVLASASTLDKDLREGATGNIDAAKKVGQLVAERAKAAGVTQVAFDRSGFKYHGRVKALADAAREGGLEF
50S ribosomal protein L19 R 116 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MTNKIIQQIEAEQMNKEIPAFAPGDTVIVQVKVKEGDRQRLQAFEGVVIAKRNRGLNSAFTVRKISNGVGVERTFQTYSPIVDSLSVKRRGDVRKAKLYYLRALSGKAARIKEKLV
50S ribosomal protein L20 S 118 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MARVKRGVIARRRHKKILKLAKGYYGARSRVFRVAKQAVIKAGQYAYRDRRQRKRQFRALWIARINAGARQNGLSYSRLIAGLKKAAIEIDRKVLADLAVNEKAAFTAIVEKAKASLA
50S ribosomal protein L21 T 103 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MYAVIVTGGKQHKVTEGEFLKVEKLDVATGEAIDFDRVLLVANGEDVKIGLPVVEGAKVTAEVVSHGRHDKVRIIKFRRRKHHMKRQGHRQWFTEIKITGIQA
50S ribosomal protein L22 U 110 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MEVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAAEIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVADK
50S ribosomal protein L23 V 99 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MNQERVFKVLLGPHISEKATGLADGKSQFVFKVATDATKLEIKKAVESLFSVKVQRVTTLNVKGKTKRTARGLGKRNDWKKAYIALQPGQDLDFATSAE
50S ribosomal protein L24 W 104 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MQKIRRDDEVIVIAGKDKGKRGKVLKVLADDRLVVGGVNLIKRHTKPNPMLGQQGGIVEKEAPLHVSNVAIFNTETSKADRVGFKVEDGKKIRVFKSTQKPVQA
50S ribosomal protein L25 X 204 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MVDFILNAQVRSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVTLELREIAKLLENEAAFSHVIALNVGGAKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGVKQAGGEISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQLAHGNDLAVANIHASRVVKEEGSEEGAAE
30S ribosomal protein S3 C 228 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MGQKVHPNGIRLGIVKEHTSVWYADRKNYADYLFADLKVREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRADIDYATYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPVAPAPRKKAAR
30S ribosomal protein S4 D 206 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MARYIGPKCKLSRREGTDLFLKSGARALDSKCKAENVPGQHGQRRGRLSDYGLQLREKQKVRRIYGVLERQFRGYYQEASRRKGSTGENLLQLLECRLDNVVYRMGFGSTRSESRQLVSHKAITVNGQTVNIPSYQVKAGDVVAVREKSKNQLRIAQALELCGQRGRVEWVEVDLDKKAGTFKSAPARSDLSADINENLIVELYSK
30S ribosomal protein S5 E 166 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MANNEQKRDEGYIEKLVQVNRVAKTVKGGRIFAFTALTVVGDGKGRVGFGRGKAREVPAAIQKAMEAARRNMIQVDLNGTTLQYPTKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKGLKNMQAPEAVAAKRGKSVEEIL
30S ribosomal protein S6 F 139 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MRHYEIVFLVHPDQSEQVGGMVERYTKAIEEDGGKIHRLEDWGRRQLAYAINNVHKAHYVLMNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTEQSEMLKAEESRNERRERRERPNDNAEGADGDDNSDSDNADE
30S ribosomal protein S7 G 156 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MPRRRVAAKREVLADPKYGSQILAKFMNHVMESGKKAVAERIVYGALDKVKERGKADPLETFEKALDAIAPLVEVKSRRVGGATYQVPVEVRPSRRNALAMRWLVDFARKRGEKSMALRLAGELLDAAEGKGAAVKKREDVHRMAEANKAFSHYRF
30S ribosomal protein S8 H 130 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MSMQDPLADMLTRIRNAQMAEKTVVSMPSSKLKAAVAKVLKDEGYIADFQISSEVKPQLSIELKYFEGKPVIEEVKRISRPGLRQYKSVEQLPKVRGGLGVSIVSTNKGVMTDRAARAAGVGGEVLCTVF
30S ribosomal protein S9 I 130 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MSATQNYGTGRRKTATARVFLRPGTGKISINNRGLDQFFGRETARMVVRQPLELTETVEKFDIFVTVVGGGVSGQAGAIRHGITRALIEYDETLRSSLRKAGYVTRDAREVERKKVGLRKARKRPQYSKR
50S ribosomal protein L27 Y 85 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MAHKKAGGSTRNGRDSESKRLGVKLFGGQAVKAGNILVRQRGTKFHAGYGVGLGKDHTLFAKVDGVVKFETKGAFGRKYVSIVAA
50S ribosomal protein L28 Z 78 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MSRVCQVTGKGPVTGNNISHAHNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIIDKRGIEAVLADLRARGEKF
50S ribosomal protein L29 1 63 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MKANELREKSVEQLNEQLLGLLRDQFNLRMQKATGQLGQSHLLSQVKRDIARVKTVLNQQAGK
50S ribosomal protein L30 2 58 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MATVKVTLVKSLNGRLANHKACVKGLGLRRINHTVEVQDTPENRGMINKAYYLLRVEG
50S ribosomal protein L31 3 71 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MKADIHPTYEAIEATCSCGNVIKTRSTLCKPIHLDVCSECHPFYTGKQKVLDTGGRIDRFKQRFGVFGATK
50S ribosomal protein L32 4 60 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MAVQQNKKSRSARDMRRSHDALESNALSVEKSTGEVHLRHHVSPDGFYRGRKVVDKGSDE
50S ribosomal protein L33 5 51 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MRELIRLVSSAGTGHFYTTDKNKRTKPEKIEIKKYDPVVRQHVIYKEAKIK
50S ribosomal protein L34 6 44 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MKRTFQPSTLKRARVHGFRARMATKNGRQVLSRRRAKGRKRLTV
50S ribosomal protein L35 7 64 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MPKMKTKSGAAKRFKKTAGGLKHKHAFKSHILTKMTTKRKRQLRGTSMLNKSDVARVERSLRLR
50S ribosomal protein L36 8 38 Escherichia Coli , Pseudomonas Aeruginosa Pao1 , Synthetic Construct MKVRASVKKLCRNCKIIRRDGIVRVICSAEPRHKQRQG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-04-11
Deposition Author(s): Basu, R.S. , Gagnon, M.G. , Sherman, M.B.