7T6I
Crystal structure of hla-dp1 in complex with pp65 peptide in reverse orientation
PDB DOI: 10.2210/pdb7t6i/pdb
Classification: IMMUNE SYSTEM Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2021-12-13 Deposition Author(s): Lim, J.J. , Reid, H. , Rossjohn, J.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.3 Å
Crystal structure of hla-dp1 in complex with pp65 peptide in reverse orientation
Lim, J.J. , Reid, H. , Rossjohn, J.
Primary Citation of Related Structures: 7T6I
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| HLA class II histocompatibility antigen DP alpha chain | A | 183 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | IKADHVSTYAAFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAILNNNLNTLIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDRFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDVYDCRVEHWGLDQPLLKHWEATSG |
| MHC class II antigen | B | 191 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | RATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARFDSDVGEFRAVTELGRPAAEYWNSQKDILEEKRAVPDRVCRHNYELDEAVTLQRRVQPKVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQEETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDVYICQVEHTSLDSPVTVEWKATGG |
| pp65 peptide | C | 17 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | LPVADAVIHASGKQMWQ |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2021-12-13 Deposition Author(s): Lim, J.J. , Reid, H. , Rossjohn, J.