The envelope glycoprotein sivmac239.k180s sosip trimer in complex with 3 copies of the neutralizing antibody k11
PDB DOI: 10.2210/pdb7t2p/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Macaca Mulatta , Simian Immunodeficiency Virus
Deposited: 2021-12-06 Deposition Author(s): Berndsen, Z.T. , Ward, A.B.
The envelope glycoprotein sivmac239.k180s sosip trimer in complex with 3 copies of the neutralizing antibody k11
Primary Citation of Related Structures: 7T2P
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Envelope glycoprotein gp120 | A | 527 | Macaca Mulatta , Simian Immunodeficiency Virus | MGCLGNQLLIAILLLSVYGIYCTLYVTVFYGVPAWRNATIPLFCATKNRDTWGTTQCLPDNGDYSEMALNVTESFDAWNNTVTEQAIEDVWQLFETSIKPCVKLSPLCITMRCNKSETDRWGLTKSITTTASTTSTTASAKVDMVNETSSCIAQDNCTGLEQEQMISCKFNMTGLKRDKSKEYNETWYSADLVCEQGNNTGNESRCYMNHCNTSVIQESCDKHYWDAIRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTYIYWHGRDNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCWFGGKWKDAIKEVKQTIVKHPRYTGTNNTDKINLTAPGGGDPEVTFMWTNCRGEFLYCKMNWFLNWVEDRNTANQKPKEQHKRNYVPCHIRQIINTWHKVGKNVYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGLAPTSCKRYTTGGTSRRRRRR |
Envelope glycoprotein gp41 | B | 159 | Macaca Mulatta , Simian Immunodeficiency Virus | GVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQLLDVPKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGCAFRQVCCTTVPWPNASLIPKWNNETWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNGSGHHHHHHHH |
K11 Fab heavy chain | H | 485 | Macaca Mulatta , Simian Immunodeficiency Virus | DWTWRILFLVAAATGAHSQVQLQESGPGVVRPSQTLSLTCAVSGDTVSSCCFFWTWIRQPPGKGLEWIGNISYDNDNTNYNPSLKTRISISKDMSKNQFSLKLNSLTATDTAIYYCARESPSRGNFCYAYLYGNCPLHFDLWGQGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGGSKPPTCPPCTSPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPDVKFNWYVNGAEVHHAQTKPRETQYNSTYRVVSVLTVTHQDWLNGKEYTCKVSNKALPAPIQKTISKDKGQPREPQVYTLPPSREELTKNQVSLTCLVKGFYPSDIVVEWESSGQPENTYKTTPPVLDSDGSYFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK |
K11 Fab light chain | L | 232 | Macaca Mulatta , Simian Immunodeficiency Virus | ETDTLLLWVLLLWVPGSTGDILLTQSPSSLSGSVGDRVTITCRASQGINSYLNWYQQKPGKAPKLLIYFANRLQSGVPSRFSGSGSGTEFTLTISSLQSEDGATYYCQQYDTFPTFGPGTKLDIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC |
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-12-06 Deposition Author(s): Berndsen, Z.T. , Ward, A.B.