Ape1 exonuclease substrate complex with 8oxog opposite a
PDB DOI: 10.2210/pdb7suv/pdb
Classification: HYDROLASE/DNA Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2021-11-18 Deposition Author(s): Freudenthal, B.D. , Whitaker, A.W.
Ape1 exonuclease substrate complex with 8oxog opposite a
Freudenthal, B.D. , Whitaker, A.W.
Primary Citation of Related Structures: 7SUV
Nucleic Acids / Hybrid | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
DNA (5'-D(P*TP*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3') | c | 11 | NA | TCGACGGATCC |
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(8OG))-3') | d | 10 | NA | GCTGATGCGG |
DNA (5'-D(*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*AP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') | e | 21 | NA | GGATCCGTCGAACGCATCAGC |
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
DNA-(apurinic or apyrimidinic site) lyase | A | 276 | Homo Sapiens , Synthetic Construct | ALYEDPPDQKTSPSGKPATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQQTKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQAPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGNLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL |
DNA-(apurinic or apyrimidinic site) lyase | B | 276 | Homo Sapiens , Synthetic Construct | ALYEDPPDQKTSPSGKPATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQQTKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQAPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGNLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL |
Method: X-RAY DIFFRACTION
Deposited Date: 2021-11-18 Deposition Author(s): Freudenthal, B.D. , Whitaker, A.W.