Crystal structure of the receptor binding domain of sars-cov-2 beta variant spike glycoprotein in complex with beta-49 and fi-3a fabs
PDB DOI: 10.2210/pdb7q0g/pdb
Classification: VIRAL PROTEIN Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2021-10-14 Deposition Author(s): Ren, J. , Stuart, D.I. , Zhou, D.
Crystal structure of the receptor binding domain of sars-cov-2 beta variant spike glycoprotein in complex with beta-49 and fi-3a fabs
Ren, J. , Stuart, D.I. , Zhou, D.
Primary Citation of Related Structures: 7Q0G
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Spike protein S1 | E | 210 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | MGCVAETGHHHHHHTNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVKGFNCYFPLQSYGFQPTYGVGYQPYRVVVLSFELLHAPATVCGKK |
| FI-3A Fab heavy chain | H | 222 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | EVQLLESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDHVRPGMNIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK |
| FI-3A Fab light chain | L | 214 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | AIRMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPVTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| Beta-49 Fab light chain | B | 216 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | AIRMTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGTSPSWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| Beta-49 Fab heavy chain | A | 223 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSSSVISWVRQAPGQGLEWMGGIIPLFGSANYAQKFQGRVTITADESTSTAYMEMTSLRSEDTAVYYCAKVSQWALILFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK |
Method: X-RAY DIFFRACTION
Deposited Date: 2021-10-14 Deposition Author(s): Ren, J. , Stuart, D.I. , Zhou, D.