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7PS6

Crystal structure of the receptor binding domain of sars-cov-2 beta variant spike glycoprotein in complex with beta-44 and beta-54 fabs

PDB DOI: 10.2210/pdb7ps6/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2021-09-22
Deposition Author(s): Ren, J. , Stuart, D.I. , Zhou, D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.26 Å

Literature

Crystal structure of the receptor binding domain of sars-cov-2 beta variant spike glycoprotein in complex with beta-44 and beta-54 fabs

Ren, J. , Stuart, D.I. , Zhou, D.

Primary Citation of Related Structures: 7PS6


Proteins
Molecule Chains Sequence Length Organism Sequence
Beta-54 Fab heavy chain H 231 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLQESGPGLVKPSETLSLTCTVFGGSITSSNHYWVWIRQPPGKGLEWIGSMYYSGSTAYNPSLTNRVTISVDTSKNQFSLKLSSVTAADTAVYYCARQIGPKRPSQVADWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
Beta-54 Fab light chain L 214 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Spike protein S1 E 210 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 MGCVAETGHHHHHHTNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVKGFNCYFPLQSYGFQPTYGVGYQPYRVVVLSFELLHAPATVCGKK
Beta-44 Fab heavy chain C 224 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISPYNGNTHYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDGELLGWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
Beta-44 Fab light chain D 218 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QSVVTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYAGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTWVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-09-22
Deposition Author(s): Ren, J. , Stuart, D.I. , Zhou, D.