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FASTA Sequence PDB Format mmCIF Format
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7M8L

Ebov gp bound to rebov-442 and rebov-515 fabs

PDB DOI: 10.2210/pdb7m8l/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Ebola Virus , Homo Sapiens

Deposited: 2021-03-30
Deposition Author(s): Murin, C.D. , Ward, A.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.9 Å

7m8l
Literature

Ebov gp bound to rebov-442 and rebov-515 fabs

Murin, C.D. , Ward, A.B.

Primary Citation of Related Structures: 7M8L


Proteins
Molecule Chains Sequence Length Organism Sequence
Virion spike glycoprotein 1 A 313 Ebola Virus , Homo Sapiens MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARSIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSVTKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYASGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFT
Virion spike glycoprotein 1 B 313 Ebola Virus , Homo Sapiens MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARSIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSVTKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYASGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFT
Virion spike glycoprotein 1 C 313 Ebola Virus , Homo Sapiens MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARSIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSVTKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYASGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFT
rEBOV-442 Fab heavy chain G 239 Ebola Virus , Homo Sapiens EVQLVESGGGLVKPGGSLRLSCTGSGGTGFTFKYAGMSWVRQAPGKGPEWIGRIKSRIDGGTTDYAAPVKDRFIVSRDDSRNTLYLQMNSLKTEDTAVYYCATGSGKGPSASFGESYYYYDFINVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
rEBOV-442 Fab heavy chain H 239 Ebola Virus , Homo Sapiens EVQLVESGGGLVKPGGSLRLSCTGSGGTGFTFKYAGMSWVRQAPGKGPEWIGRIKSRIDGGTTDYAAPVKDRFIVSRDDSRNTLYLQMNSLKTEDTAVYYCATGSGKGPSASFGESYYYYDFINVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
rEBOV-442 Fab heavy chain I 239 Ebola Virus , Homo Sapiens EVQLVESGGGLVKPGGSLRLSCTGSGGTGFTFKYAGMSWVRQAPGKGPEWIGRIKSRIDGGTTDYAAPVKDRFIVSRDDSRNTLYLQMNSLKTEDTAVYYCATGSGKGPSASFGESYYYYDFINVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
rEBOV-442 Fab light chain J 215 Ebola Virus , Homo Sapiens ESVLTQSPGTLSLSPGERATLSCRASQSISRKYLAWYQQKPGQAPRLLIYGSSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCHQYESSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
rEBOV-442 Fab light chain K 215 Ebola Virus , Homo Sapiens ESVLTQSPGTLSLSPGERATLSCRASQSISRKYLAWYQQKPGQAPRLLIYGSSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCHQYESSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
rEBOV-442 Fab light chain L 215 Ebola Virus , Homo Sapiens ESVLTQSPGTLSLSPGERATLSCRASQSISRKYLAWYQQKPGQAPRLLIYGSSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCHQYESSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
Virion spike glycoprotein 2 D 203 Ebola Virus , Homo Sapiens NNNTHHQDTGEESASSGKLGLITNTIAGVAGLITGGRRTRREVIVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
Virion spike glycoprotein 2 E 203 Ebola Virus , Homo Sapiens NNNTHHQDTGEESASSGKLGLITNTIAGVAGLITGGRRTRREVIVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
Virion spike glycoprotein 2 F 203 Ebola Virus , Homo Sapiens NNNTHHQDTGEESASSGKLGLITNTIAGVAGLITGGRRTRREVIVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
rEBOV-515 Fab heavy chain M 225 Ebola Virus , Homo Sapiens QVQLHESGPGLVKPSQTLSLTCTVSGGSINSAGYYWTWIRQHPGKGLEWIGYIDYTGRTYYNPSLESRVIISIDTSKNHFSLRLTSVSAADTAVYYCARESSWVSELGRDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
rEBOV-515 Fab heavy chain N 225 Ebola Virus , Homo Sapiens QVQLHESGPGLVKPSQTLSLTCTVSGGSINSAGYYWTWIRQHPGKGLEWIGYIDYTGRTYYNPSLESRVIISIDTSKNHFSLRLTSVSAADTAVYYCARESSWVSELGRDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
rEBOV-515 Fab heavy chain O 225 Ebola Virus , Homo Sapiens QVQLHESGPGLVKPSQTLSLTCTVSGGSINSAGYYWTWIRQHPGKGLEWIGYIDYTGRTYYNPSLESRVIISIDTSKNHFSLRLTSVSAADTAVYYCARESSWVSELGRDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
rEBOV-515 Fab light chain P 214 Ebola Virus , Homo Sapiens EIVMTQSPATLPVSPGEGATLSCRASQSVFTNLAWYQQKPGQAPRLLIYDASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPRTYGQGTRVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
rEBOV-515 Fab light chain Q 214 Ebola Virus , Homo Sapiens EIVMTQSPATLPVSPGEGATLSCRASQSVFTNLAWYQQKPGQAPRLLIYDASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPRTYGQGTRVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
rEBOV-515 Fab light chain R 214 Ebola Virus , Homo Sapiens EIVMTQSPATLPVSPGEGATLSCRASQSVFTNLAWYQQKPGQAPRLLIYDASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPRTYGQGTRVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-03-30
Deposition Author(s): Murin, C.D. , Ward, A.B.