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7M0D

Pre-catalytic quaternary complex of dna polymerase lambda with bound complementary dsb substrate and incoming dumpnpp

PDB DOI: 10.2210/pdb7m0d/pdb

Classification: TRANSFERASE
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2021-03-10
Deposition Author(s): Bebenek, K. , Kaminski, A.M. , Kunkel, T.A. , Pedersen, L.C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.8 Å

7m0d
Literature

Pre-catalytic quaternary complex of dna polymerase lambda with bound complementary dsb substrate and incoming dumpnpp

Bebenek, K. , Kaminski, A.M. , Kunkel, T.A. , Pedersen, L.C.

Primary Citation of Related Structures: 7M0D


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase lambda A 346 Homo Sapiens , Synthetic Construct GSAAAVLDKWVCAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW
DNA polymerase lambda B 346 Homo Sapiens , Synthetic Construct GSAAAVLDKWVCAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*GP*GP*CP*AP*GP*C)-3') g 7 NA CGGCAGC
DNA (5'-D(*CP*GP*GP*CP*AP*GP*C)-3') k 7 NA CGGCAGC
DNA (5'-D(*CP*AP*GP*TP*GP*C)-3') f 6 NA CAGTGC
DNA (5'-D(*CP*AP*GP*TP*GP*C)-3') j 6 NA CAGTGC
DNA (5'-D(P*GP*CP*CP*G)-3') h 4 NA GCCG
DNA (5'-D(P*GP*CP*CP*G)-3') l 4 NA GCCG
DNA (5'-D(*AP*CP*TP*G)-3') i 4 NA ACTG
DNA (5'-D(*AP*CP*TP*G)-3') e 4 NA ACTG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-03-10
Deposition Author(s): Bebenek, K. , Kaminski, A.M. , Kunkel, T.A. , Pedersen, L.C.