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7KN7

Crystal structure of sars-cov-2 receptor binding domain complexed with nanobody vhh w and antibody fab cc12.3

PDB DOI: 10.2210/pdb7kn7/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Salmonella Enterica , Gammaretrovirus , Pyrobaculum Ferrireducens

Deposited: 2020-11-04
Deposition Author(s): Liu, H. , Wilson, I.A. , Wu, N.C. , Yuan, M. , Zhu, X.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.73 Å

7kn7
Literature

Crystal structure of sars-cov-2 receptor binding domain complexed with nanobody vhh w and antibody fab cc12.3

Liu, H. , Wilson, I.A. , Wu, N.C. , Yuan, M. , Zhu, X.

Primary Citation of Related Structures: 7KN7


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 A 231 Salmonella Enterica , Gammaretrovirus , Pyrobaculum Ferrireducens RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFSGHHHHHH
VHH W B 140 Salmonella Enterica , Gammaretrovirus , Pyrobaculum Ferrireducens QVQLVESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGDSTHYVDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAQSGSYYWCGSDWHEYDYRGQGTQVTVSSGGLPETGGHHHHHH
CC12.3 Fab heavy chain H 220 Salmonella Enterica , Gammaretrovirus , Pyrobaculum Ferrireducens QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
CC12.3 Fab light chain L 214 Salmonella Enterica , Gammaretrovirus , Pyrobaculum Ferrireducens EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-11-04
Deposition Author(s): Liu, H. , Wilson, I.A. , Wu, N.C. , Yuan, M. , Zhu, X.