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FASTA Sequence PDB Format mmCIF Format
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7KJX

Structure of hiv-1 reverse transcriptase initiation complex core with nevirapine

PDB DOI: 10.2210/pdb7kjx/pdb

Classification: viral protein/RNA
Organism(s): Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) , Synthetic Construct

Deposited: 2020-10-26
Deposition Author(s): Chen, D.H. , Fu, Z. , Ha, B. , Jackson, L.N. , Larsen, K.P. , Montabana, E. , Puglisi, E.V. , Zhang, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

7kjx
Literature

Structure of hiv-1 reverse transcriptase initiation complex core with nevirapine

Chen, D.H. , Fu, Z. , Ha, B. , Jackson, L.N. , Larsen, K.P. , Montabana, E. , Puglisi, E.V. , Zhang, J.

Primary Citation of Related Structures: 7KJX


Proteins
Molecule Chains Sequence Length Organism Sequence
Reverse transcriptase/ribonuclease H A 562 Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) , Synthetic Construct MVPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDICKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTQLQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKIL
reverse transcriptase p51 subunit B 442 Human Immunodeficiency Virus 1 , Human Immunodeficiency Virus Type 1 Group M Subtype B (Isolate Bh10) , Synthetic Construct MVPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLSKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETF

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
HIV-1 viral RNA fragment c 26 NA GCAGUGGCGCCCGAACAGGGACUUGA
tRNA lysine 3 fragment with GNRA tetraloop d 22 NA UCAAGUCCCUGUUCGGGCGCCA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-10-26
Deposition Author(s): Chen, D.H. , Fu, Z. , Ha, B. , Jackson, L.N. , Larsen, K.P. , Montabana, E. , Puglisi, E.V. , Zhang, J.