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7KIJ

Muscovy duck circovirus rep domain complexed with a single-stranded dna 10-mer comprising the cleavage site

PDB DOI: 10.2210/pdb7kij/pdb

Classification: REPLICATION/DNA
Organism(s): Methylobacterium Extorquens , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2020-10-23
Deposition Author(s): Gordon, W.R. , Shi, K. , Tompkins, K.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.69 Å

Literature

Muscovy duck circovirus rep domain complexed with a single-stranded dna 10-mer comprising the cleavage site

Gordon, W.R. , Shi, K. , Tompkins, K.J.

Primary Citation of Related Structures: 7KIJ


Proteins
Molecule Chains Sequence Length Organism Sequence
ATP-dependent helicase Rep C 111 Methylobacterium Extorquens , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MAKSGNYSYKRWVFTINNPTFEDYVHVLEFCTLDNCKFAIVGEEKGANGTPHLQGFLNLRSNARAAALEESLGGRAWLSRARGSDEDNEEFCAKESTYLRVGEPVSKGRSS
ATP-dependent helicase Rep A 111 Methylobacterium Extorquens , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MAKSGNYSYKRWVFTINNPTFEDYVHVLEFCTLDNCKFAIVGEEKGANGTPHLQGFLNLRSNARAAALEESLGGRAWLSRARGSDEDNEEFCAKESTYLRVGEPVSKGRSS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*TP*AP*TP*TP*AP*TP*TP*AP*CP*C)-3') d 10 NA TATTATTACC
DNA (5'-D(*TP*AP*TP*TP*AP*TP*TP*AP*CP*C)-3') b 10 NA TATTATTACC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-10-23
Deposition Author(s): Gordon, W.R. , Shi, K. , Tompkins, K.J.