7KHH
Ternary complex of vhl/brd4-bd1/compound9 (4-(3,5-difluoropyridin-2-yl)-n-(11-(((s)-1-((2s,4r)-4-hydroxy-2-((4-(4-methylthiazol-5-yl)benzyl)carbamoyl)pyrrolidin-1-yl)-3,3-dimethyl-1-oxobutan-2-yl)amino)-11-oxoundecyl)-10-methyl-7-((methylsulfonyl)methyl)-11-oxo-3,4,10,11-tetrahydro-1h-1,4,10-triazadibenzo[cd,f]azulene-6-carboxamide)
PDB DOI: 10.2210/pdb7khh/pdb
Classification: PEPTIDE BINDING PROTEIN Organism(s): Homo Sapiens
Deposited: 2020-10-21 Deposition Author(s): Murray, J.M.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.281 Å
Ternary complex of vhl/brd4-bd1/compound9 (4-(3,5-difluoropyridin-2-yl)-n-(11-(((s)-1-((2s,4r)-4-hydroxy-2-((4-(4-methylthiazol-5-yl)benzyl)carbamoyl)pyrrolidin-1-yl)-3,3-dimethyl-1-oxobutan-2-yl)amino)-11-oxoundecyl)-10-methyl-7-((methylsulfonyl)methyl)-11-oxo-3,4,10,11-tetrahydro-1h-1,4,10-triazadibenzo[cd,f]azulene-6-carboxamide)
Primary Citation of Related Structures: 7KHH
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Elongin-B | A | 118 | Homo Sapiens | MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMKPQDSGSSANEQAVQ |
| Elongin-C | B | 96 | Homo Sapiens | MYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC |
| von Hippel-Lindau disease tumor suppressor | C | 175 | Homo Sapiens | MHHHHHHGENLYFQGSEAGRPRPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD |
| Bromodomain-containing protein 4 | D | 149 | Homo Sapiens | MHHHHHHSSGVDLGTENLYFQSNANPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2020-10-21 Deposition Author(s): Murray, J.M.