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FASTA Sequence PDB Format mmCIF Format
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7KFV

Structural basis for a germline-biased antibody response to sars-cov-2 (rbd:c1a-b12 fab)

PDB DOI: 10.2210/pdb7kfv/pdb

Classification: IMMUNE SYSTEM/Viral protein
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2020-10-15
Deposition Author(s): Abraham, J. , Clark, L. , Clark, S. , Pan, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.102 Å

7kfv
Literature

Structural basis for a germline-biased antibody response to sars-cov-2 (rbd:c1a-b12 fab)

Abraham, J. , Clark, L. , Clark, S. , Pan, J.

Primary Citation of Related Structures: 7KFV


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike glycoprotein A 228 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 GSGSGRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNF
Spike glycoprotein B 228 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 GSGSGRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNF
Spike glycoprotein E 228 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 GSGSGRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNF
Heavy chain of antibody C1A-B12 Fab C 225 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGDVSGYRYGLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDR
Heavy chain of antibody C1A-B12 Fab F 225 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGDVSGYRYGLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDR
Heavy chain of antibody C1A-B12 Fab H 225 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGDVSGYRYGLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDR
light chain of antibody C1A-B3 Fab D 214 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 DIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLISYPGTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
light chain of antibody C1A-B3 Fab G 214 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 DIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLISYPGTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
light chain of antibody C1A-B3 Fab L 214 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 DIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLISYPGTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-10-15
Deposition Author(s): Abraham, J. , Clark, L. , Clark, S. , Pan, J.