7KFE
Bundibugyo virus gp (mucin deleted) bound to antibody fab bdbv-329
PDB DOI: 10.2210/pdb7kfe/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Bundibugyo Ebolavirus , Homo Sapiens
Deposited: 2020-10-13 Deposition Author(s): Murin, C.D. , Ward, A.B.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 6.6 Å
Bundibugyo virus gp (mucin deleted) bound to antibody fab bdbv-329
Primary Citation of Related Structures: 7KFE
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Antibody BDBV-329 heavy chain | H | 244 | Bundibugyo Ebolavirus , Homo Sapiens | QVQLVQSGAEVKKPGSSVKVSCKASGGTFDTYAISWVRQAPGQGLEWMGGIIPVLGIVDYAQKFQGRVTITAAKFTNIAYMELSSLRSEDAAVYYCARGLRSLSPRGQEGPTPAPGWRRAQYHYYYMDVWGTGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD |
| Antibody BDBV-329 heavy chain | G | 244 | Bundibugyo Ebolavirus , Homo Sapiens | QVQLVQSGAEVKKPGSSVKVSCKASGGTFDTYAISWVRQAPGQGLEWMGGIIPVLGIVDYAQKFQGRVTITAAKFTNIAYMELSSLRSEDAAVYYCARGLRSLSPRGQEGPTPAPGWRRAQYHYYYMDVWGTGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD |
| Antibody BDBV-329 light chain | J | 215 | Bundibugyo Ebolavirus , Homo Sapiens | EIVMTQSPGTLSLSPGERATLSCRASQSVSSNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGPDFTLTISRLEPEDFAVYYCQQYGSSPGTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC |
| Antibody BDBV-329 light chain | I | 215 | Bundibugyo Ebolavirus , Homo Sapiens | EIVMTQSPGTLSLSPGERATLSCRASQSVSSNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGPDFTLTISRLEPEDFAVYYCQQYGSSPGTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC |
| Spike glycoprotein 1 | A | 343 | Bundibugyo Ebolavirus , Homo Sapiens | MVTSGILQLPRERFRKTSFFVWVIILFHKVFPIPLGVVHNNTLQVSDIDKLVCRDKLSSTSQLKSVGLNLEGNGVATDVPTATKRWGFRAGVPPKVVNYEAGEWAENCYNLDIKKADGSECLPEAPEGVRGFPRCRYVHKVSGTGPCPEGYAFHKEGAFFLYDRLASTIIYRSTTFSEGVVAFLILPETKKDFFQSPPLHEPANMTTDPSSYYHTVTLNYVADNFGTNMTNFLFQVDHLTYVQLEPRFTPQFLVQLNETIYTNGRRSNTTGTLIWKVNPTVDTGVGEWAFWENKKNFTKTLSSEELSVIFVPIDISESTEPGPLTNTTRGAANLLTGSRRTRR |
| Spike glycoprotein 1 | B | 343 | Bundibugyo Ebolavirus , Homo Sapiens | MVTSGILQLPRERFRKTSFFVWVIILFHKVFPIPLGVVHNNTLQVSDIDKLVCRDKLSSTSQLKSVGLNLEGNGVATDVPTATKRWGFRAGVPPKVVNYEAGEWAENCYNLDIKKADGSECLPEAPEGVRGFPRCRYVHKVSGTGPCPEGYAFHKEGAFFLYDRLASTIIYRSTTFSEGVVAFLILPETKKDFFQSPPLHEPANMTTDPSSYYHTVTLNYVADNFGTNMTNFLFQVDHLTYVQLEPRFTPQFLVQLNETIYTNGRRSNTTGTLIWKVNPTVDTGVGEWAFWENKKNFTKTLSSEELSVIFVPIDISESTEPGPLTNTTRGAANLLTGSRRTRR |
| Spike glycoprotein 1 | C | 343 | Bundibugyo Ebolavirus , Homo Sapiens | MVTSGILQLPRERFRKTSFFVWVIILFHKVFPIPLGVVHNNTLQVSDIDKLVCRDKLSSTSQLKSVGLNLEGNGVATDVPTATKRWGFRAGVPPKVVNYEAGEWAENCYNLDIKKADGSECLPEAPEGVRGFPRCRYVHKVSGTGPCPEGYAFHKEGAFFLYDRLASTIIYRSTTFSEGVVAFLILPETKKDFFQSPPLHEPANMTTDPSSYYHTVTLNYVADNFGTNMTNFLFQVDHLTYVQLEPRFTPQFLVQLNETIYTNGRRSNTTGTLIWKVNPTVDTGVGEWAFWENKKNFTKTLSSEELSVIFVPIDISESTEPGPLTNTTRGAANLLTGSRRTRR |
| Envelope glycoprotein 2 | D | 177 | Bundibugyo Ebolavirus , Homo Sapiens | EITLRTQAKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGIMHNQNGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDFIDKPLPDQTDVEVDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK |
| Envelope glycoprotein 2 | E | 177 | Bundibugyo Ebolavirus , Homo Sapiens | EITLRTQAKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGIMHNQNGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDFIDKPLPDQTDVEVDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK |
| Envelope glycoprotein 2 | F | 177 | Bundibugyo Ebolavirus , Homo Sapiens | EITLRTQAKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGIMHNQNGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDFIDKPLPDQTDVEVDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2020-10-13 Deposition Author(s): Murin, C.D. , Ward, A.B.