PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7KC1

Cryo-em structure of srr2899884.46167h+medi8852l fab in complex with victoria ha

PDB DOI: 10.2210/pdb7kc1/pdb

Classification: IMMUNE SYSTEM
Organism(s): Salmonella Enterica , Anoxybacillus Sp. Lm18-11 , Streptomyces Hygroscopicus Subsp. Limoneus

Deposited: 2020-10-04
Deposition Author(s): Gorman, J. , Kwong, P.D.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.41 Å

7kc1
Literature

Cryo-em structure of srr2899884.46167h+medi8852l fab in complex with victoria ha

Gorman, J. , Kwong, P.D.

Primary Citation of Related Structures: 7KC1


Proteins
Molecule Chains Sequence Length Organism Sequence
Hemagglutinin A 345 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 , Streptomyces Hygroscopicus Subsp. Limoneus MKTIIALSHILCLVFAQKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQNSSIGEICDSPHQILDGENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEFNNESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTQLNFKYPALNVTMPNNEQFDKLYIWGVHHPVTDKDQIFLYAQSSGRITVSTKRSQQAVIPNIGYRPRIRNIPSRISIYWTIVKPGDILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRITYGACPRYVKQSTLKLATGMRNVPEKQTR
Hemagglutinin C 345 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 , Streptomyces Hygroscopicus Subsp. Limoneus MKTIIALSHILCLVFAQKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQNSSIGEICDSPHQILDGENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEFNNESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTQLNFKYPALNVTMPNNEQFDKLYIWGVHHPVTDKDQIFLYAQSSGRITVSTKRSQQAVIPNIGYRPRIRNIPSRISIYWTIVKPGDILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRITYGACPRYVKQSTLKLATGMRNVPEKQTR
Hemagglutinin G 345 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 , Streptomyces Hygroscopicus Subsp. Limoneus MKTIIALSHILCLVFAQKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQNSSIGEICDSPHQILDGENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEFNNESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTQLNFKYPALNVTMPNNEQFDKLYIWGVHHPVTDKDQIFLYAQSSGRITVSTKRSQQAVIPNIGYRPRIRNIPSRISIYWTIVKPGDILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRITYGACPRYVKQSTLKLATGMRNVPEKQTR
Fusion protein of Hemagglutinin and Envelope glycoprotein B 222 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 , Streptomyces Hygroscopicus Subsp. Limoneus GIFGAIAGFIENGWEGMVDGWYGFRHQNSEGRGQAADLKSTQAAIDQINGKLNRLIGKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTKKQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDVYRDEALNNRFQIKGVSGRLVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHH
Fusion protein of Hemagglutinin and Envelope glycoprotein D 222 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 , Streptomyces Hygroscopicus Subsp. Limoneus GIFGAIAGFIENGWEGMVDGWYGFRHQNSEGRGQAADLKSTQAAIDQINGKLNRLIGKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTKKQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDVYRDEALNNRFQIKGVSGRLVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHH
Fusion protein of Hemagglutinin and Envelope glycoprotein I 222 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 , Streptomyces Hygroscopicus Subsp. Limoneus GIFGAIAGFIENGWEGMVDGWYGFRHQNSEGRGQAADLKSTQAAIDQINGKLNRLIGKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTKKQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDVYRDEALNNRFQIKGVSGRLVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHH
Fab heavy chain H 227 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 , Streptomyces Hygroscopicus Subsp. Limoneus QIQLQQSGPGLVKPSQTLSLTCSISGDTVTNNYAAWDWIRQSPTRGLEWLGRTFYRSKWYKEYALSVKSRLTISPDTSKNQISLQLSSVTPEDTAVYYCARAGITIFGLITGGLDYWGQGSLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
Fab heavy chain E 227 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 , Streptomyces Hygroscopicus Subsp. Limoneus QIQLQQSGPGLVKPSQTLSLTCSISGDTVTNNYAAWDWIRQSPTRGLEWLGRTFYRSKWYKEYALSVKSRLTISPDTSKNQISLQLSSVTPEDTAVYYCARAGITIFGLITGGLDYWGQGSLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
Fab heavy chain J 227 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 , Streptomyces Hygroscopicus Subsp. Limoneus QIQLQQSGPGLVKPSQTLSLTCSISGDTVTNNYAAWDWIRQSPTRGLEWLGRTFYRSKWYKEYALSVKSRLTISPDTSKNQISLQLSSVTPEDTAVYYCARAGITIFGLITGGLDYWGQGSLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
Fab light chain L 206 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 , Streptomyces Hygroscopicus Subsp. Limoneus MTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
Fab light chain F 206 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 , Streptomyces Hygroscopicus Subsp. Limoneus MTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
Fab light chain K 206 Salmonella Enterica , Anoxybacillus Sp. Lm18-11 , Streptomyces Hygroscopicus Subsp. Limoneus MTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-10-04
Deposition Author(s): Gorman, J. , Kwong, P.D.