Crystallographic structure of two neutralizing nanobodies in complex with sars-cov-2 spike receptor-binding domain (rbd)
PDB DOI: 10.2210/pdb7fh0/pdb
Classification: ANTIVIRAL PROTEIN Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos
Deposited: 2021-07-28 Deposition Author(s): Jin, J. , Zheng, P.
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Spike protein S1,Spike protein S1 | A | 438 | Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos | RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNK |
nanobodies aRBD-2-7 | B | 261 | Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos | QVQLVESGGGLVQAGGSLRLSCAASGRTYTMGWFRQAPGKEREFVAAMRWSDTDYADSLKGRFTISRDNANNAMYLQMNSLGPEDTAVYYCAAGEAWLARSTHHYDYWGQGTQVTVSSGGGGSGGGGSGGGGSQLQLVESGGGLVQAGGSLRLSCAASERTFSGGVMGWFRQRPGKEREFVAAIRWNGASTFYADSVKGRFTCSRDNAKNTGYLQMNSLTPEDTAVYYCARAVRTYASSDYYFQERTYDYWGQGTQVTVSS |
nanobodies aRBD-2-7 | C | 261 | Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos | QVQLVESGGGLVQAGGSLRLSCAASGRTYTMGWFRQAPGKEREFVAAMRWSDTDYADSLKGRFTISRDNANNAMYLQMNSLGPEDTAVYYCAAGEAWLARSTHHYDYWGQGTQVTVSSGGGGSGGGGSGGGGSQLQLVESGGGLVQAGGSLRLSCAASERTFSGGVMGWFRQRPGKEREFVAAIRWNGASTFYADSVKGRFTCSRDNAKNTGYLQMNSLTPEDTAVYYCARAVRTYASSDYYFQERTYDYWGQGTQVTVSS |
Method: X-RAY DIFFRACTION