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7F3J

Crystal structure of human ybx2 csd in complex with m5c rna in space group p1

PDB DOI: 10.2210/pdb7f3j/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2021-06-16
Deposition Author(s): Huang, Y. , Zhang, Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.95 Å

7f3j
Literature

Crystal structure of human ybx2 csd in complex with m5c rna in space group p1

Huang, Y. , Zhang, Y.

Primary Citation of Related Structures: 7F3J


Proteins
Molecule Chains Sequence Length Organism Sequence
Y-box-binding protein 2 A 93 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) ADKPVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNR
Y-box-binding protein 2 C 93 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) ADKPVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNR
Y-box-binding protein 2 E 93 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) ADKPVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNR
Y-box-binding protein 2 G 93 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) ADKPVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNR

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(*UP*CP*AP*UP*(5MC))-3') b 7 NA UCAUCUU
RNA (5'-R(*UP*CP*AP*UP*(5MC))-3') d 7 NA UCAUCUU
RNA (5'-R(*UP*CP*AP*UP*(5MC))-3') f 7 NA UCAUCUU
RNA (5'-R(*UP*CP*AP*UP*(5MC))-3') h 7 NA UCAUCUU
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-06-16
Deposition Author(s): Huang, Y. , Zhang, Y.