Local cryoem structure of the sars-cov-2 s6pv2 in complex with bd-812 fab and bd-836 fab
PDB DOI: 10.2210/pdb7ezv/pdb
Classification: VIRAL PROTEIN Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2021-06-02 Deposition Author(s): Liu, P.L.
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Spike glycoprotein | A | 1285 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | MFVFLVLLPLVSSQCVNFTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFANPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRGLPQGFSALEPLVDLPIGINITRFQTLHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVKGFNCYFPLQSYGFQPTYGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPGSASSVASQSIIAYTMSLGVENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGRSLEVLFQGPGHHHHHHHHSAWSHPQFEKGGGSGGGGSGGSAWSHPQFEK |
| 812 H | H | 248 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | MGWSLILLFLVAVATRVLSEVQLVQSGAEVKKPGESLKISCQFSEYKLISFWIAWVRQRPGKGLEWMGIIYPDDSDTKYSPSSQGQVTISADKSIRTAYLQWSSLMASDTAMYYCTSGSYYGTLDFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH |
| 812L | L | 233 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | MGWSCIILFLVATATGVHSDIEITQSPSSLSASVGDRVTISCRASQDIRTYVAWYQQRPGKVPRLLIYAASTLQSGVPSRFSGRGSGTDFTLTISSLQPEDVATYYCQQYNSAPLTFGGGAKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| 836H | M | 253 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | MGWSLILLFLVAVATRVLSQVQLVQSGPEVKKPGTSVRVSCKASGFTFSTSAVQWVRQARGQRLEWIGWIAVGSGKTDYLQKFQERVTMTRDESTNTAYMQLSSLRSEDTAVYYCAAPHCSGGTCYDGFDIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH |
| 836L | N | 234 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | MGWSCIILFLVATATGVHSEIVLTQSPGTLSLSPGERATLSCRASQSVRSGYFAWYQQRPGRAPRLLIYGASSRATAIPDRFSGSGSGTDFTLTINRLEPEDFAVYYCQQYGTSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-06-02 Deposition Author(s): Liu, P.L.