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FASTA Sequence PDB Format mmCIF Format
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7E1B

Crystal structure of vbrr-dna complex

PDB DOI: 10.2210/pdb7e1b/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Vibrio Parahaemolyticus

Deposited: 2021-02-01
Deposition Author(s): Hong, S. , Zhang, P. , Zhang, X.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 4.587 Å

7e1b
Literature

Crystal structure of vbrr-dna complex

Hong, S. , Zhang, P. , Zhang, X.

Primary Citation of Related Structures: 7E1B


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA-binding response regulator A 220 Vibrio Parahaemolyticus MKQTLLLVEDDKNLADGLLVSLEQAGYECLHVERIADVEPQWKKADLVILDRQLPDGDSVQHLPEWKKIKDVPVILLTALVTVKDKVAGLDSGANDYLTKPFAEAELFARIRAQLRAPDSADQANADKVMTKDLEIDRATREVIFKGDLITLTRTEFDLLLFLASNLGRVFTRDELLDHVWGYNHFPTTRTVDTHVLQLRQKLPGLEIETLRGVGYKMKA
DNA-binding response regulator B 220 Vibrio Parahaemolyticus MKQTLLLVEDDKNLADGLLVSLEQAGYECLHVERIADVEPQWKKADLVILDRQLPDGDSVQHLPEWKKIKDVPVILLTALVTVKDKVAGLDSGANDYLTKPFAEAELFARIRAQLRAPDSADQANADKVMTKDLEIDRATREVIFKGDLITLTRTEFDLLLFLASNLGRVFTRDELLDHVWGYNHFPTTRTVDTHVLQLRQKLPGLEIETLRGVGYKMKA
DNA-binding response regulator C 220 Vibrio Parahaemolyticus MKQTLLLVEDDKNLADGLLVSLEQAGYECLHVERIADVEPQWKKADLVILDRQLPDGDSVQHLPEWKKIKDVPVILLTALVTVKDKVAGLDSGANDYLTKPFAEAELFARIRAQLRAPDSADQANADKVMTKDLEIDRATREVIFKGDLITLTRTEFDLLLFLASNLGRVFTRDELLDHVWGYNHFPTTRTVDTHVLQLRQKLPGLEIETLRGVGYKMKA
DNA-binding response regulator D 220 Vibrio Parahaemolyticus MKQTLLLVEDDKNLADGLLVSLEQAGYECLHVERIADVEPQWKKADLVILDRQLPDGDSVQHLPEWKKIKDVPVILLTALVTVKDKVAGLDSGANDYLTKPFAEAELFARIRAQLRAPDSADQANADKVMTKDLEIDRATREVIFKGDLITLTRTEFDLLLFLASNLGRVFTRDELLDHVWGYNHFPTTRTVDTHVLQLRQKLPGLEIETLRGVGYKMKA
DNA-binding response regulator E 220 Vibrio Parahaemolyticus MKQTLLLVEDDKNLADGLLVSLEQAGYECLHVERIADVEPQWKKADLVILDRQLPDGDSVQHLPEWKKIKDVPVILLTALVTVKDKVAGLDSGANDYLTKPFAEAELFARIRAQLRAPDSADQANADKVMTKDLEIDRATREVIFKGDLITLTRTEFDLLLFLASNLGRVFTRDELLDHVWGYNHFPTTRTVDTHVLQLRQKLPGLEIETLRGVGYKMKA
DNA-binding response regulator F 220 Vibrio Parahaemolyticus MKQTLLLVEDDKNLADGLLVSLEQAGYECLHVERIADVEPQWKKADLVILDRQLPDGDSVQHLPEWKKIKDVPVILLTALVTVKDKVAGLDSGANDYLTKPFAEAELFARIRAQLRAPDSADQANADKVMTKDLEIDRATREVIFKGDLITLTRTEFDLLLFLASNLGRVFTRDELLDHVWGYNHFPTTRTVDTHVLQLRQKLPGLEIETLRGVGYKMKA
DNA-binding response regulator G 220 Vibrio Parahaemolyticus MKQTLLLVEDDKNLADGLLVSLEQAGYECLHVERIADVEPQWKKADLVILDRQLPDGDSVQHLPEWKKIKDVPVILLTALVTVKDKVAGLDSGANDYLTKPFAEAELFARIRAQLRAPDSADQANADKVMTKDLEIDRATREVIFKGDLITLTRTEFDLLLFLASNLGRVFTRDELLDHVWGYNHFPTTRTVDTHVLQLRQKLPGLEIETLRGVGYKMKA
DNA-binding response regulator H 220 Vibrio Parahaemolyticus MKQTLLLVEDDKNLADGLLVSLEQAGYECLHVERIADVEPQWKKADLVILDRQLPDGDSVQHLPEWKKIKDVPVILLTALVTVKDKVAGLDSGANDYLTKPFAEAELFARIRAQLRAPDSADQANADKVMTKDLEIDRATREVIFKGDLITLTRTEFDLLLFLASNLGRVFTRDELLDHVWGYNHFPTTRTVDTHVLQLRQKLPGLEIETLRGVGYKMKA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (26-MER) y 26 NA CACAATTCTAATTCTTCATCGCTTGT
DNA (26-MER) i 26 NA CACAATTCTAATTCTTCATCGCTTGT
DNA (26-MER) z 26 NA ACAAGCGATGAAGAATTAGAATTGTG
DNA (26-MER) j 26 NA ACAAGCGATGAAGAATTAGAATTGTG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2021-02-01
Deposition Author(s): Hong, S. , Zhang, P. , Zhang, X.