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FASTA Sequence PDB Format mmCIF Format
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7DQ7

Cryo-em structure of coxsackievirus b1 mature virion in complex with nab 5f5

PDB DOI: 10.2210/pdb7dq7/pdb

Classification: VIRUS/IMMUNE SYSTEM
Organism(s): Coxsackievirus B1 , Mus Musculus

Deposited: 2020-12-22
Deposition Author(s): Cheng, T. , Li, S. , Xu, L. , Zheng, Q. , Zhu, R.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

7dq7
Literature

Cryo-em structure of coxsackievirus b1 mature virion in complex with nab 5f5

Cheng, T. , Li, S. , Xu, L. , Zheng, Q. , Zhu, R.

Primary Citation of Related Structures: 7DQ7


Proteins
Molecule Chains Sequence Length Organism Sequence
Virion protein 1 A 278 Coxsackievirus B1 , Mus Musculus GPVEESVDRAVARVADTISSRPTNSESIPALTAAETGHTSQVVPSDTMQTRHVKNYHSRSESSIENFLCRSACVYYATYTNNSKKGFAEWVINTRQVAQLRRKLELFTYLRFDLELTFVITSAQQPSTASSVDAPVQTHQIMYVPPGGPVPTKVKDYAWQTSTNPSVFWTEGNAPPRMSIPFISIGNAYSCFYDGWTQFSRNGVYGINTLNNMGTLYMRHVNEAGQGPIKSTVRIYFKPKHVKAWVPRPPRLCQYEKQKNVNFSPIGVTTSRTDIITT
VP2 B 263 Coxsackievirus B1 , Mus Musculus SPSAEECGYSDRVRSITLGNSTITTQECANVVVGYGVWPEYLKDNEATAEDQPTQPDVATCRFYTLESVQWMKNSAGWWWKLPDALSQMGLFGQNMQYHYLGRTGYTIHVQCNASKFHQGCLLVVCVPEAEMGCSNLNNTPEFSELSGGDSARMFTDTQVGESNAKKVQTAVWNAGMGVGVGNLTIFPHQWINLRTNNSATLVMPYINSVPMDNMFRHNNLTLMIIPFVPLNYSEGSSPYVPITVTIAPMCAEYNGLRLASNQ
VP3 C 238 Coxsackievirus B1 , Mus Musculus GLPVMTTPGSTQFLTSDDFQSPSAMPQFDVTPEMQIPGRVNNLMEIAEVDSVVPVNNTEDNVSSLKAYQIPVQSNSDNGKQVFGFPLQPGANNVLNRTLLGEILNYYTHWSGSIKLTFMFCGSAMATGKFLLAYSPPGAGVPKNRKDAMLGTHVIWDVGLQSSCVLCVPWISQTHYRYVVEDEYTAAGYVTCWYQTNIVVPADVQSSCDILCFVSACNDFSVRMLKDTPFIRQDTFYQ
Capsid protein VP4 D 69 Coxsackievirus B1 , Mus Musculus MGAQVSTQKTGAHETGLNASGNSVIHYTNINYYKDAASNSANRQDFTQDPGKFTEPVKDIMVKTMPALN
5F5 VL L 106 Coxsackievirus B1 , Mus Musculus QIVLSQSPAILSASPGEKVTMTCRASSSVSYLHWYQQKPGSSPKPWISATSNLASGVPARFSGSGSGTSYSLTISRVEAEDAATYYCQQWSSNPLSFGGGTKLELK
5F5 VH H 123 Coxsackievirus B1 , Mus Musculus EIQLQQSGPELVKPGASVKVSCKASGYSFTDYNIYWVKQSHGKSLEWIGYVDPYNGNTNYNQKFKGKATLTVDKSSSTAFMHLNSLTSEVSTVYYCARGGGYYGGGYYGMDYWGQGTSVTVSS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-12-22
Deposition Author(s): Cheng, T. , Li, S. , Xu, L. , Zheng, Q. , Zhu, R.