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FASTA Sequence PDB Format mmCIF Format
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7DFH

Structure of covid-19 rna-dependent rna polymerase bound to ribavirin

PDB DOI: 10.2210/pdb7dfh/pdb

Classification: VIRAL PROTEIN/RNA
Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct

Deposited: 2020-11-08
Deposition Author(s): Li, Z. , Yu, X. , Zhou, Z.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.97 Å

7dfh
Literature

Structure of covid-19 rna-dependent rna polymerase bound to ribavirin

Li, Z. , Yu, X. , Zhou, Z.

Primary Citation of Related Structures: 7DFH


Proteins
Molecule Chains Sequence Length Organism Sequence
RNA-directed RNA polymeras A 943 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct MSADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQGGSENLYFQG
Non-structural protein 8 B 199 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct MAIASEFSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRANSAVKLQ
Non-structural protein 8 G 199 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct MAIASEFSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRANSAVKLQ
Non-structural protein 7 C 84 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct MSKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*GP*CP*UP*AP*UP*GP*UP*G*(LIG))-3') p 8 NA GCUAUGUG
RNA (5'-R(P*CP*CP*CP*CP*CP*AP*CP*AP*UP*AP*GP*C)-3') t 12 NA CCCCCACAUAGC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-11-08
Deposition Author(s): Li, Z. , Yu, X. , Zhou, Z.