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FASTA Sequence PDB Format mmCIF Format
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7DBH

The mouse nucleosome structure containing h3mm18

PDB DOI: 10.2210/pdb7dbh/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Mus Musculus

Deposited: 2020-10-20
Deposition Author(s): Hirai, S. , Kujirai, T. , Kurumizaka, H. , Takizawa, Y.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

Literature

The mouse nucleosome structure containing h3mm18

Hirai, S. , Kujirai, T. , Kurumizaka, H. , Takizawa, Y.

Primary Citation of Related Structures: 7DBH


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3mm18 A 139 Mus Musculus GSHMARTKQTARKSTGDKAPRKQLATKAARKSAPSTGGVKKPHCYRPGTVALREIRSYQKSSELLIRKLPFQRLVLEIAQDFKTDLCFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDTQLAGYICRECA
Histone H3mm18 E 139 Mus Musculus GSHMARTKQTARKSTGDKAPRKQLATKAARKSAPSTGGVKKPHCYRPGTVALREIRSYQKSSELLIRKLPFQRLVLEIAQDFKTDLCFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDTQLAGYICRECA
Histone H4 B 106 Mus Musculus GSHMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 F 106 Mus Musculus GSHMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1-B C 133 Mus Musculus GSHMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2A type 1-B G 133 Mus Musculus GSHMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2B type 3-A D 129 Mus Musculus GSHMPEPSRSTPAPKKGSKKAITKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
Histone H2B type 3-A H 129 Mus Musculus GSHMPEPSRSTPAPKKGSKKAITKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (126-MER) i 145 NA ATCAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCGAT
DNA (126-MER) j 145 NA ATCGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTGAT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-10-20
Deposition Author(s): Hirai, S. , Kujirai, T. , Kurumizaka, H. , Takizawa, Y.