PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7D0F

Cryo-em structure of a pre-catalytic group ii intron rnp

PDB DOI: 10.2210/pdb7d0f/pdb

Classification: TRANSFERASE/RNA
Organism(s): Lactococcus Lactis Subsp. Cremoris

Deposited: 2020-09-10
Deposition Author(s): Belfort, M. , Dong, X.L. , Hu, C.X. , Liu, N. , Wang, H.W. , Wang, J. , Wang, J.W. , Zeng, J.W.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 5.0 Å

7d0f
Literature

Cryo-em structure of a pre-catalytic group ii intron rnp

Belfort, M. , Dong, X.L. , Hu, C.X. , Liu, N. , Wang, H.W. , Wang, J. , Wang, J.W. , Zeng, J.W.

Primary Citation of Related Structures: 7D0F


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (738-MER) a 915 NA CACAUCCAUAACGUGCGCCCAGAUAGGGUGUUAAGUCAAGUAGUUUAAGGUACUACUCUGUAAGAUAACACAGAAAACAGCCAACCUAACCGAAAAGCGAAAGCUGAUACGGGAACAGAGCACGGUUGGAAAGCGAUGAGUUACCUAAAGACAAUCGGGUACGACUGAGUCGCAAUGUUAAUCAGAUAUAAGGUAUAAGUUGUGUUUACUGAACGCAAGUUUCUAAUUUCGGUUAUGUGUCGAUAGAGGAAAGUGUCUGAAACCUCUAGUACAAAGAAAGGUAAGUUAUGGUUGUGGACUUAUCUGUUAUCACCACAUUUGUACAAUCUGUAGGAGAACCUAUGGGAACGAAACGAAAGCGAUGCCGAGAAUCUGAAUUUACCAAGACUUAACACUAACUGGGGAUACCCUAAACAAGAAUGCCUAAUAGAAAGGAGGAAAAAGGCUAUAGCACUAGAGCUUGAAAAUCUUGCAAGGGUACGGAGUACUCGUAGUAGUCUGAGAAGGGUAACGCCCUUUACAUGGCAAAGGGGUACAGUUAUUGUGUACUAAAAUUAAAAAUUGAUUAGGGAGGAAAACCUCAAAAUGAAACCAACAAUGGCAAUUUUAGAAAGAAUCAGUAAAAAUUCACAAGAAAAUAUAGACGAAGUUUUUACAAGACUUUAUCGUUAUCUUUUACGUCCAGAUAUUUAUUACGUGGCGACGCGUUGGGAAAUGGCAAUGAUAGCGAAACAACGUAAAACUCUUGUUGUAUGCUUUCAUUGUCAUCGUCACGUGAUUCAUAAACACAAGUGAAUUUUUACGAACGAACAAUAACAGAGCCGUAUACUCCGAGAGGGGUACGUACGGUUCCCGAAGAGGGUGGUGCAAACCAGUCACAGUAAUGUGAACAAGGCGGUACCUCCCUCUUCACCA

Proteins
Molecule Chains Sequence Length Organism Sequence
Group II intron-encoded protein LtrA C 599 Lactococcus Lactis Subsp. Cremoris MKPTMAILERISKNSQENIDEVFTRLYRYLLRPDIYYVAYQNLYSNKGASTKGILDDTADGFSEEKIKKIIQSLKDGTYYPQPVRRMYIAKKNSKKMRPLGIPTFTDKLIQEAVRIILESIYEPVFEDVSHGFRPQRSCHTALKTIKREFGGARWFVEGDIKGCFDNIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQYHKTYSGTPQGGILSPLLANIYLHELDKFVLQLKMKFDRESPERITPEYRELHNEIKRISHRLKKLEGEEKAKVLLEYQEKRKRLPTLPCTSQTNKVLKYVRYADDFIISVKGSKEDCQWIKEQLKLFIHNKLKMELSEEKTLITHSSQPARFLGYDIRVRRSGTIKRSGKVKKRTLNGSVELLIPLQDKIRQFIFDKKIAIQKKDSSWFPVHRKYLIRSTDLEIITIYNSELRGICNYYGLASNFNQLNYFAYLMEYSCLKTIASKHKGTLSKTISMFKDGSGSWGIPYEIKQGKQRRYFANFSECKSPYQFTDEISQAPVLYGYARNTLENRLKAKCCELCGTSDENTSYEIHHVNKVKNLKGKEKWEMAMIAKQRKTLVVCFHCHRHVIHKHK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-09-10
Deposition Author(s): Belfort, M. , Dong, X.L. , Hu, C.X. , Liu, N. , Wang, H.W. , Wang, J. , Wang, J.W. , Zeng, J.W.